VSCode IDE with and .rmd markdownfile using Python packages with reticulate
Never thought I'd reach the point of writing R with Python packages. Nor did I ever think I'd write in light mode 🤔 🤨
21.09.2025 02:17 — 👍 2 🔁 0 💬 0 📌 0
A STUB1–CHIC2 complex inhibits CD8+ T cells to restrain tumor immunity
Nature Immunology - LaFleur, Milling et al. perform an in vivo CRISPR screen of CD8+ T cells responding to tumors. They identify the E3 ubiquitin ligase STUB1 as a potent negative regulator of CD8+...
Excited to share our paper in
@natimmunol.nature.com! Using in vivo #CRISPR screens we identify the E3 ligase STUB1 as a new cancer immunotherapy target in CD8 T cells. STUB1 is a dual function target: STUB1 KO promotes CD8 responses and STUB1 KO hinders tumor cells. www.nature.com/articles/s41...
12.08.2025 18:49 — 👍 9 🔁 4 💬 0 📌 0
Software Engineer at Posit PBC.
I mostly post about R, Python, and Deep Learning.
Github: https://github.com/t-kalinowski
Functional genomics @ Broad Institute. Screen all the things!
Postdoctoral Fellow studying tumor immunology in the Boston area (Arlene Sharpe’s lab). In my free time, I enjoy reading and traveling with my wife Sarah.
Computational medicine @ AU
Founder @ KH Biotechnology
Creator of spatiomic, pytximport and https://biocontext.ai
Interested in spatial omics, cancer & ageing
Lab: https://github.com/complextissue/
Personal: https://maltekuehl.com
Opinions my own.
Doctoral Student at the Carnegie Mellon University - University of Pittsburgh Joint Ph.D. Program in Computational Biology (CPCB). Former - Mathematics, IIT Bombay
Computational biologist interested in gene expression regulation.
Associate Director and Group Leader at Norwegian Centre for Molecular Biosciences and Medicine, University of Oslo, Nordic EMBL Partnership for Molecular Medicine.
https://mathelierlab.com
Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Statistician, Computational Biologist, R |> Bioconductor
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Clinical Bioinformatics @boehringer with interests in NGS, cloud, @nf_core , cancer & immunology. Tweets are my own. @alex_peltzer@genomic.social
Bioinfomagician/PhD in Bioinformatics, developing @nextflow.io @nf-co.re pipelines
Posts and RPs in English/French - He/him
Bioinformatics engineer at Seqera (seqera.io) & Nextflow ambassador
Genomics 🧬 | Spatial omics🔬 | technology 💻 | soccer ⚽
Working towards scalable and reproducible science with #Nextflow
Living in Montreal 🇨🇦
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Associate Professor of Data Science & asst. Dean of Research at UVA School of Data Science, #Rstats enthusiast, dad, runner, guitar noise-maker. Views my own.
Web: https://stephenturner.us/
Newsletter: https://blog.stephenturner.us
PhD student @uniofnottingham.bsky.social | MPH @yalesph.bsky.social | all things conflict & health 🌍 | #freesyria #بدنا_المعتقلين
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