Maxime U Garcia's Avatar

Maxime U Garcia

@maxulysse.github.io

Bioinfomagician/PhD in Bioinformatics, developing @nextflow.io @nf-co.re pipelines at @seqera.io Posts and RPs in English/French - He/him

1,526 Followers  |  1,537 Following  |  18 Posts  |  Joined: 25.09.2023  |  1.7136

Latest posts by maxulysse.github.io on Bluesky

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🎉Celebrating 10 Years of @multiqc.info

What began as a simple QC reporting tool has evolved into an essential resource used by thousands worldwide, becoming integral to the #bioinformatics ecosystm.

🔍 Discover MultiQC: hubs.la/Q03Bh0wM0

05.08.2025 07:44 — 👍 10    🔁 4    💬 1    📌 1

🎉 Today marks 10 years since the very first @multiqc.info commit!

What started as a simple tool for QC reports has grown into something used by thousands of labs worldwide. It's become a foundational tool in the fabric of #bioinformatics and it's a joy to see it play a small part in global research

04.08.2025 20:03 — 👍 10    🔁 4    💬 1    📌 1
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Next week, Terradue will be present at the ESA Living Planet Symposium 2025, held in Vienna, Austria. | terradue Next week, Terradue will be present at the ESA Living Planet Symposium 2025, held in Vienna, Austria. LPS is one of the most important global events dedicated to Earth Observation. We’re thrilled to b...

Next week, we'll be present at the @esaearth.esa.int Living Planet Symposium 2025 #LPS25, in Vienna, Austria.

🌍We’re thrilled to be part of the dialogue shaping the future of EO science and technology.

www.linkedin.com/posts/terrad...

20.06.2025 14:02 — 👍 3    🔁 2    💬 0    📌 0
Announcement for upcoming Earth Observation Lab contribution at living planet symposium 2025: 
Kummer et al.: Standardizing Earth Observation Workflows with Nextflow and nf-core
Session: D.04.02 Best practices for execution of algorithms and workflows across federated cloud environments
Where: Hall L3
When: Thursday 26.06.25 / 11:30 h

Announcement for upcoming Earth Observation Lab contribution at living planet symposium 2025: Kummer et al.: Standardizing Earth Observation Workflows with Nextflow and nf-core Session: D.04.02 Best practices for execution of algorithms and workflows across federated cloud environments Where: Hall L3 When: Thursday 26.06.25 / 11:30 h

Coming up next at #LPS25:
Felix Kummer et al.: Standardizing Earth Observation Workflows with Nextflow and nf-core 

📍11:30 at Hall L3
@kelewinska.bsky.social @hostertp.bsky.social

26.06.2025 08:04 — 👍 8    🔁 3    💬 0    📌 0
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I just helped assemble a tile for the LEGO Sentinel-2 Mosaic #LPS25 #ESA #EO

25.06.2025 06:32 — 👍 3    🔁 1    💬 0    📌 0
Esha Joshi: Scale with Seqera: Accelerate, Expand, and Collaborate
YouTube video by Nextflow Esha Joshi: Scale with Seqera: Accelerate, Expand, and Collaborate

🎤 Did you catch Esha Joshi's talk on scaling with @seqera.io?

In this talk, she shared how Seqera empowers scientists to scale code, compute, projects, and teams—from early experimentation to enterprise-level deployments. 💻

🔗 Watch the full talk here: hubs.la/Q03pHjL00

29.05.2025 13:07 — 👍 4    🔁 3    💬 1    📌 0

Pipeline release! nf-core/bamtofastq v2.2.0 - 2.2.0 - Kathleen Booth!

Please see the changelog: https://github.com/nf-core/bamtofastq/releases/tag/2.2.0

23.05.2025 12:31 — 👍 2    🔁 1    💬 0    📌 0
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🎉 Nextflow Summit Boston 2025 – What a Week!

Last week, we brought together industry experts from around the world to shape the future of biotech and pharma through innovation in data science and computational biology. Here are a some key highlights 🧵

20.05.2025 13:57 — 👍 9    🔁 3    💬 1    📌 0
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🎉The #NextflowSummit Boston 2025 has officially come to a close.

Over the past few days, we’ve seen inspiring presentations from across the community—highlighting the latest @nextflow.io innovations, real-world applications & the groundbreaking work accelerating discovery

16.05.2025 17:21 — 👍 7    🔁 1    💬 1    📌 0
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Setting up the Nextflow Language Server (LSP) with NeoVim | Living Systems_

New short blog: Setting up the @nextflow.io Language Server (LSP) with NeoVim livesys.se/posts/nextfl...

16.05.2025 21:43 — 👍 7    🔁 4    💬 0    📌 0
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Supporting Community at the Core of Innovation 🌍🙌

We were honored to provide space at the #NextflowSummit Boston for the incredible Boston Women in Bioinformatics group to gather, connect, and celebrate a major milestone: becoming a 501(c)(3) nonprofit! 🎉

16.05.2025 15:42 — 👍 7    🔁 3    💬 1    📌 0
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We’ve just dropped some powerful new @nextflow.io features as part of the 25.04 release, all designed to enhance clarity, control, and collaboration in workflow development. 🎉

💡Learn more: hubs.la/Q03mQ2_10

15.05.2025 18:25 — 👍 4    🔁 4    💬 1    📌 1
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What an incredible few days! 🎉The @nextflow.io Training and @nf-co.re Hackathon have officially wrapped up. A huge thank you to all the trainers, organizers, and participants who made it possible

14.05.2025 21:28 — 👍 6    🔁 2    💬 1    📌 0
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Day 2 of the #NextflowSummit Boston 2025 is underway! Participants are diving into @nextflow.io Training sessions and collaborating at the @nf-co.re Hackathon — an incredible day of learning, building, and innovation ahead! 💻

14.05.2025 14:50 — 👍 5    🔁 2    💬 1    📌 0
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The #NextflowSummit Boston is happening in just 2 days! 🎉Can’t be there in person? Don’t miss out—leaders across biotech, pharma & life sciences will gather to explore the future of data-driven innovation.

Register now to get the event recording: hubs.la/Q03mjtdX0

13.05.2025 17:55 — 👍 5    🔁 3    💬 0    📌 0
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Time for a lunch break here at #NextflowSummit🥪 Don’t forget to grab your @nextflow.io and @nf-co.re stickers and add ribbons to your name tag if you haven’t already! 🎀

13.05.2025 17:03 — 👍 5    🔁 2    💬 0    📌 0
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And we’re off! 🚀The @nextflow.io Training and @nf-co.re Hackathon are officially underway at the #NextflowSummit in Boston. Excited to kick things off and thrilled to have so many of you here with us!

13.05.2025 14:27 — 👍 8    🔁 4    💬 0    📌 0

Pipeline release! nf-core/rnavar v1.1.0 - nf-core/rnavar 1.1.0 - Mighty Milano!

Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.1.0

10.04.2025 09:35 — 👍 1    🔁 1    💬 0    📌 0
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My Tiny Chess Roguelike has a Steam Page!

♟️💥 Wishlist Gambonanza and break the rules 💥♟️

store.steampowered.com/app/3509230/...

#gamedev #indiegame

17.03.2025 16:59 — 👍 62    🔁 19    💬 6    📌 4
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R-Ladies is rebranding to R-Ladies+ - R-Ladies Global R-Ladies is a world-wide organization to promote gender diversity in the R community

In order to better align with our mission to support all underrepresented genders in the R community, R-Ladies is re-branding to R-Ladies+! 💜 🌈 🏳️‍⚧️ ⚧️

✨ R-Ladies is rebranding to R-Ladies+ rladies.org/news/rebrand...
✨ Rebranding Call For Proposal rladies.org/news/rebrand...

#rstats #rladies

14.03.2025 15:07 — 👍 102    🔁 33    💬 0    📌 4
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📢 Last call! Tomorrow is the final day to submit your speaker proposal for #NextflowSummit Boston!

This is your opportunity to take to the stage, showcase your work, and engage with the #Nextflow community.

🎤Submit your abstract today: hubs.la/Q03bKN4D0

13.03.2025 14:28 — 👍 2    🔁 2    💬 1    📌 0

Weekly help desk is STARTING in 30 min! 🚀Come join us in the in the nf-core office in Gather to discuss EVERYTHING 🐬 -> app.gather.town/app/b2RCFGS2...
James Fellow Yates and @maxulysse.github.io will be showcasing what is currently happening during the spring cleaning 🧹

13.03.2025 08:36 — 👍 6    🔁 1    💬 0    📌 0
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Hello Nextflow: Intro and setup Enjoy the videos and music you love, upload original content, and share it all with friends, family, and the world on YouTube.

The #Nextflow #Training week has begun! 🎉

New to Nextflow or need a guided intro? Watch the brand new on-demand walkthrough videos for the "Hello Nextflow" course, and learn at your own pace!

hubs.la/Q03b2-Rk0

10.03.2025 11:07 — 👍 10    🔁 6    💬 1    📌 1
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🚀 Next week is #Nextflow #Training Week!

We’ve got fresh new material ✨ including “Hello Nextflow”, premiering on the @nextflow.io YouTube channel 🎬

Got questions? The #Nextflow #Ambassadors are ready, standing-by on the Community Forum all week 💬

Sign up here:
community.seqera.io/t/nextflow-t...

07.03.2025 16:19 — 👍 11    🔁 4    💬 0    📌 2
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SciLifeLab seminar: Automation of research processes with LLMs and AI | Phil Ewels Building and testing scientific workflows with LLMs and AI agents

I've just put my slides online, along with the links mentioned in my talk. You can find them on my website:

phil.ewels.co.uk/talks/2025/0...

06.03.2025 21:42 — 👍 4    🔁 1    💬 0    📌 1
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Exclusive: NIH to terminate hundreds of active research grants Studies that touch on LGBT+ health, gender identity and DEI in the biomedical workforce could be terminated, according to documents obtained by Nature.

In an unprecedented move, the US National Institutes of Health has begun mass terminations of research grants that fund active scientific projects because they no longer meet “agency priorities”.


https://go.nature.com/4bpG2It

06.03.2025 02:25 — 👍 352    🔁 281    💬 21    📌 47

It is insanely fast compared to pip.
Just tried the to re-install @nf-co.re tools, and I was amazed by the speed <3

03.03.2025 10:59 — 👍 0    🔁 0    💬 0    📌 0
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Nextflow Training Week (2025-Q1) 🚀 Nextflow Training Week is a new quarterly self-paced online training designed for accessibility and flexibility. Featuring on-demand walkthrough videos and near real-time support via the community f...

🚀 Introducing #Nextflow Training Week!

A free, self-paced online training designed to help beginners get started with Nextflow.

📅 March 10-14, 2025
🎥 On-demand videos and real-time support
💬 Ask questions in our community forum

Learn more and join us: hubs.la/Q038kTQm0

26.02.2025 08:22 — 👍 16    🔁 10    💬 0    📌 4
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Release 1.0.0 Innocent Pamuk · nf-core/variantbenchmarking First release! by @kubranarci What's Changed pin nf-validation version by @nvnieuwk in #6 wittyer added by @kubranarci in #24 sv + small analysis implemented by @kubranarci in #30 sv benchmark par...

Pipeline release! nf-core/variantbenchmarking v1.0.0 - Innocent Pamuk

Please see the changelog: github.com/nf-core/vari...

24.02.2025 12:11 — 👍 3    🔁 2    💬 0    📌 1

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