Segata Lab

Do not miss the Illumina #MVIF webinar: Nicola Segata, @serenamanara.bsky.social, and Amadou D. Gueye will discuss the latest NGS advances in microbiome reseach!

Registration free!

#mbkceesme2025

#mbkceesme2025

#mbkceesme2025

#mbkceesme2025 🇬🇷
already mingling

@mikrobiokosmos.bsky.social

Congrats to ALL #EESMicrobiome poster prize winners!

Our lab member ✨ Gabriel Baldanzi ✨ won the prize with his poster on gut microbiome signature of type 2 diabetes in 3,692 cases and >200,000 controls.

☀️ It’s a sunny day at 'The human microbiome' symposium and the vibes are just right 😎 #EESMicrobiome

Nothing beats enjoying lunch outdoors, soaking up the late summer sun, and catching up with colleagues between sessions 🌿🍴

Such an engaged audience at #EESMicrobiome with lots of great questions after my talk!

Big thanks to the organisers for inviting me to present some of the teams recent early life #microbiome work.

Conference has been AMAZING so far!

☀️ Good morning from Day 3 of #EESMicrobiome 🦠

☕🥨 Fuelled by coffee and pretzels, we’re starting strong with Session 4: Microbiome–host interactions in health and disease.

🎤 'Understanding gut-to-host communication to prevent cardiovascular disease' by @fzmarques.bsky.social (Monash University)

TODAY at #EESMicrobiome

TODAY at #EESMicrobiome

👋 @luispedrocoelho.bsky.social ( @bigdatabiology.bsky.social )

The human microbiome

Day 2 of the The human Microbiome conference #EESMicrobiome - Our editor Dr. Ruby Ponnudurai @rubyponnudurai.bsky.social is on the Meet the Editor panel today at lunch. Get in touch with her to know more about @reviewcommons.org.

The human microbiome www.embl.org/about/info/c...

Our scientific organisers opened ‘The human microbiome’ symposium by giving us a brief update on their most recent work 🦠 #EESMicrobiome

🔹Mani Arumugam, University of Copenhagen
🔹Ami Bhatt, Stanford University School of Medicine
🔹Peer Bork, EMBL Heidelberg
🔹Nicola Segata, University of Trento

mikrobiokosmos2025

NEXT WEEK -> #mbkceesme2025 🇬🇷

Drop me a line if you want to chat over ☕ about open science and open source: #BugSigDB #curatedMetagenomicData @microbiomevif.bsky.social #Outreachy @nsurp.bsky.social #microbiomedigest

👋 @mikrobiokosmos.bsky.social

See you at #EESMicrobiome in Heidelberg🇩🇪

EMBL event program

On Thursday, 18 Sept.
Flash talk (ft) session 2 (16:30 -17:10)
and Poster (p) session 2 (17:10 – 19:10)

✨ Gabriel Baldanzi
✨ Gianmarco Piccinno
✨ @cengoni.bsky.social
will present our latest findings!

Looking forward to sharing #microbiome science!

3/3

EMBL event program

On Wednesday, 17 Sept.
from 16h
don't miss Flash talk (ft) session 1
and Poster (p) session 1

and meet our lab members:
✨ @fackelmeister.bsky.social
✨ @vheidrich.bsky.social

2/3

GloMiNe 2025 by Microbiota Vault and MVIF - 9th/11th September 2025 - YouTube

#GloMiNe recordings now available!!

@cassyni.bsky.social ▶️ cassyni.com/s/mvif-glomi...

YouTube ▶️ www.youtube.com/playlist?lis...

@microbiotavault.bsky.social #MVIF

Thanks @tosina.bsky.social for putting all up.

MVIF Season 5 program

#MVIF Season 5 has started!

Check out the program and
feel free to join the keynotes by presenting your work–abstract submission is open:
www.microbiome-vif.org/en-US/-/info...

See you at #EESMicrobiome in Heidelberg🇩🇪

The human microbiome

NEXT WEEK we are at #EESMicrobiome in Heidelberg @events.embl.org

Full program: www.embl.org/about/info/c...

On Tuesday, 16 Sept.
see you at Session 1
from 15:30
✨Liviana Ricci will give a talk "Microbial strain transmission between infants in nurseries drives gut microbiome development"

1/3

EMBL event program

On Thursday, 18 Sept.
Flash talk (ft) session 2 (16:30 -17:10)
and Poster (p) session 2 (17:10 – 19:10)

✨ Gabriel Baldanzi
✨ Gianmarco Piccinno
✨ @cengoni.bsky.social
will present our latest findings!

Looking forward to sharing #microbiome science!

3/3

EMBL event program

On Wednesday, 17 Sept.
from 16h
don't miss Flash talk (ft) session 1
and Poster (p) session 1

and meet our lab members:
✨ @fackelmeister.bsky.social
✨ @vheidrich.bsky.social

2/3

The human microbiome

NEXT WEEK we are at #EESMicrobiome in Heidelberg @events.embl.org

Full program: www.embl.org/about/info/c...

On Tuesday, 16 Sept.
see you at Session 1
from 15:30
✨Liviana Ricci will give a talk "Microbial strain transmission between infants in nurseries drives gut microbiome development"

1/3

mvif season 5

June #MVIF updated!

@julesdeep.bsky.social

#MeetTheSpeakers
🎤Gloria Dominguez-Bello will open #GloMiNe2025 in Atlantic & Pacific events, both LIVE!

Youzheng Teo and Anton Lavrinienko in the Atlantic event,
Adrian Egli in the Pacific event
will introduce the @microbiotavault.bsky.social initiative

More info👇 cassyni.com/s/mvif-glomi...

1/n

👋 Season 5 program is coming soon!

Follow #MVIF NEWS here and 👉 www.microbiome-vif.org/en-US

Check out our latest publication where we performed AMR screening in ~2000 metagenomes from food and production surfaces in Europe. >60% samples carrying ARGs, >70% of all ARG found, and critical role of non-ESKAPEE from surfaces of the latest stages of production over the final products’ resistome!

IBFG slide

We're happy to welcome @nmquijada.bsky.social to our lab as a visiting researcher!

Narciso is a researcher from Instituto de Biología Funcional y Genómica (IBFG) who investigates food microbiome and resistome as well as contributes to bioinformatics efforts in the field github.com/nmquijada

FEMS2025

Our lab member @amirn.bsky.social will be attending the @femsmicro.org conference in Milan 🇮🇹 next week.

Feel free to connect or meet up at the #FEMS2025!

If you miss the talk on Wednesday (details ⬇️)
you can check out the poster with ID Number: wed_2.1_519_S

FEMS2025

Our lab member @amirn.bsky.social will be attending the @femsmicro.org conference in Milan 🇮🇹 next week.

Feel free to connect or meet up at the #FEMS2025!

If you miss the talk on Wednesday (details ⬇️)
you can check out the poster with ID Number: wed_2.1_519_S

Highly recommended!