Detection of alternative splicing: deep sequencing or deep learning? https://www.biorxiv.org/content/10.1101/2025.08.23.671909v1
28.08.2025 02:47 — 👍 3 🔁 1 💬 0 📌 0
SingleRust: A High-Performance Toolkit for Single-Cell Data Analysis at Scale https://www.biorxiv.org/content/10.1101/2025.08.04.668429v1
05.08.2025 19:47 — 👍 8 🔁 5 💬 0 📌 0
Our preprint is finally out for SingleRust:
doi.org/10.1101/2025...
Stay tuned: @singlerust.bsky.social, @ianfd.bsky.social
github.com/SingleRust
06.08.2025 06:10 — 👍 2 🔁 3 💬 0 📌 0
This week I presented DataSAIL at the #ISMBECCB2025 conference in #Liverpool
It has been an amazing chance and experience to meet many people working on information leakage. And getting great ideas to extend it
Nicely supervised by & colaborated with @dbblumenthal.bsky.social @ok55991.bsky.social
24.07.2025 16:03 — 👍 5 🔁 4 💬 0 📌 0
I am very excited to share the publication of our tool StructMAn 2.0 in the NAR webserver issue (10.1093/nar/gkaf381). If you want to annotate protein structures to protein sequences or if you are looking for structural evidence for PPIs, consider using: tools.helmholtz-hips.de/structman/
18.06.2025 15:05 — 👍 3 🔁 1 💬 0 📌 0
DataSAIL is out in @naturecomms.bsky.social
Since the preprint, we have improved the work a lot, thanks to countless reviewers and feedback.
You can find it here: nature.com/articles/s41...
Thanks, @dbblumenthal.bsky.social and @ok55991.bsky.social, for helping and supervising me on this journey.
09.04.2025 08:20 — 👍 5 🔁 2 💬 0 📌 1
Bioinformagician at AlphaFold DB 🧙🏼♂️| PDBe team at EMBL-EBI | Helping you unlock the magic of AlphaFold DB with new features and tools 🔬✨ | Proud LEGO enthusiast 🧱 | Turning data into discoveries!
🧬 Human Data Sharing Expert
🌱 Community & Collaboration Builder
👩💻 Bioinformatics & Metadata Enthusiast
🙌 Open Science Advocate
🇺🇸 in 🇬🇧
Assistant Professor at Vanderbilt Univ. Medical Center. Arrhythmia genetics, ion channels, high-throughput methods. http://andrewglazerlab.com.
International research centre devoted to curing #cancer and other diseases linked to #aging. @cerca.cat center, member of @bist.eu.
www.irbbarcelona.org
Professor at Johns Hopkins Biomedical Engineering and CS, Director Malone Center for Engineering in Healthcare, Research Director (Strategy and Partnerships) Data Science and AI Institute
Solve Biology
Head of Generative Genomics, Wellcome Sanger Institute, Cambridge, UK
Systems + Synthetic Biology, CRG, Barcelona
http://barcelonacollaboratorium.com http://allox.bio https://www.sanger.ac.uk/programme/generative-and-synthetic-genomics/
EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
He/him, Bioinformatician @ imb.de
Opinions are my own
Group leader in Computational Biology working on (single-cell) epigenomics and cancer @dkfz.bsky.social
@scherermichael@genomic.social
https://orcid.org/0000-0001-7990-6179
Institute of Medical Informatics, University of Münster
Computational Structural Biology @biozentrum.unibas.ch @unibas.ch @sib.swiss | President of the Research Council of the @snsf-ch.bsky.social | Team Science 🧪
software consultant & dev at TNG;
bioinformatician by training;
illustrations as a hobby;
The Ensembl project seeks to enable genomic science by providing high-quality, integrated annotation.
Vertebrates: www.ensembl.org
Non-vertebrates: www.ensemblgenomes.org
You can test the new Ensembl browser and share your feedback at beta.ensembl.org
Research, news, and commentary from Nature, the international science journal. For daily science news, get Nature Briefing: https://go.nature.com/get-Nature-Briefing
Cutting-edge research, news, commentary, and visuals from the Science family of journals. https://www.science.org
Citizenscience Projekt - Neue Bodenbakterien entdecken! Finding new soil bacteria together. http://www.microbelix.de
Convinced European 🇪🇺, Nature enthusiast, Professor of Chemistry/Saarland Uni and group lead at HIPS, wheelchair-bound. 325 ppm. Views are my own. http://www.helmholtz-hips.de
Nucleic Acids Research (NAR), from Oxford University Press, publishes the results of leading-edge research into physical, chemical, biochemical and biological aspects of nucleic acids and proteins involved in nucleic acid metabolism and/or interactions
