Goodbye Australia, what a wonderful trip it has been, capped by the fantastic International Guardia and Cryptosporidium Conference in Melbourne. Until next time! #IGCC25
27.02.2025 11:33 — 👍 0 🔁 0 💬 0 📌 0
Pathogenwatch
A global platform for genomic surveillance.
We’ve just released a public Pathogenwatch collection of the MRSN Diversity Panel comprising 100 diverse K. pneumoniae clinical isolates: pathogen.watch/collection/8... #KlebClub
12.02.2025 10:08 — 👍 8 🔁 6 💬 1 📌 0
I am one of these NSF postdocs. NSF has frozen everyone’s access to their salaries and research stipends (that were already awarded) with no information about when they might be expected to be unfrozen. It still appears like we are expected to continue doing our work though.
31.01.2025 00:43 — 👍 1381 🔁 591 💬 37 📌 18
This is absolutely awful.
31.01.2025 17:48 — 👍 0 🔁 0 💬 0 📌 0
Parapipe: a Pipeline for Handling Parasite NGS Datasets and its Application to Cryptosporidium
Preprint up detailing our work on Parapipe: a pipeline for handling protozoan NGS datasets, integrating polyclonality analysis with high resolution phylogenomic clustering for eukaryotic pathogen surveillance.
With a healthy dose of Crypto, of course!
www.biorxiv.org/content/10.1...
21.01.2025 20:37 — 👍 1 🔁 1 💬 0 📌 0
Parapipe: a Pipeline for Handling Parasite NGS Datasets and its Application to Cryptosporidium https://www.biorxiv.org/content/10.1101/2025.01.16.633364v1
22.01.2025 00:47 — 👍 1 🔁 1 💬 0 📌 0
Cohort 3 projects – onezoo.cf.ac.uk
The latest OneZoo projects are up! Eagle eyed readers will notice a certain Cryptosporidium evolutionary genomics project...
onezoo.uk/projects/coh...
06.12.2024 11:35 — 👍 1 🔁 1 💬 0 📌 0
A Shropshire lass expatriated to Wales, dog lover, plant scientist and Welsh learner. Post-doc at Cardiff University interested in pollen tube and pistil interactions and cell cycle. She/her/Dr.
Molecular and biochemical parasitoligist at Imperial College London: trypanosomes, malaria, drug discovery, lipidomics, metabolomics, proteomics, microscopy, vaccines
A global platform for genomic pathogen surveillance. Developed by the Centre for Genomic Pathogen Surveillance, University of Oxford, UK.
Professor of Parasitology, Research Director at Keele University, UK. Cutaneous leishmaniasis (CL), stigma, NTDs. Co-lead of ECLIPSE. President of British Soc Parasitology. (she/her). Views my own. https://orcid.org/0000-0003-1537-4390
The mission of the BSP is to advance the study of parasitology, aid communication within the community, and promote dissemination of advances in the field.
http://www.bsp.uk.net/
Senior lecturer. Metagenomics, bioinformatics, data science, databases, error analyses and writing code. Aberystwyth, UK. she/her.
Orcid: 0000-0001-8315-3659
Senior Program Officer in the Genomic Epidemiology and Modelling team at The Bill & Melinda Gates Foundation. Pathogen genomics and bioinformatics.
Genomic epidemiologist at the Centre for Genomic Pathogen Surveillance at Oxford. How can microbial genomics improve health in high infectious disease settings?
Die Virenjägerin! 🏹🧬!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of the orig SC2 variant-tracking website, CoVariants.org
I like 🐈 & 🛫
@firefoxx66@mstdn.science
An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
pathoplexus.org
Public health genomics and big computers working in Wales. Parent of two small children. Gamer, foodie, geek. Also likes cats. Views my own.
VC’s fellow, geomorphologist modelling the water beneath glaciers on Earth and Mars- Aberystwyth University
Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility
National monitoring and research project. If you find a dead otter please call England: 03708 506 506, Wales: 0300 065 3000, Scotland: 01471 822 487
All things Microbes, DNA and Computers
Professor of Computational Biology @ Queen’s University Belfast (QUB).
www.creeveylab.org
Reader in Biochemistry: parasitic worm proteomics and protein biochemistry for novel drug and vaccine development #TeamMassSpec #TeamFluke #CPFC ❤️💙🦅
Microbial bioinformatics, genomics, software, clinical and public health microbiology
More details at https://tseemann.github.io
