Unified Generation of Regionalized Neural Organoids from Single-Lumen Neuroepithelium https://www.biorxiv.org/content/10.1101/2025.11.18.689013v1
18.11.2025 21:32 β π 2 π 2 π¬ 0 π 0@syncelljoshua.bsky.social
Graduate student in the Ebrahimkhani lab at the University of Pittsburgh.
Unified Generation of Regionalized Neural Organoids from Single-Lumen Neuroepithelium https://www.biorxiv.org/content/10.1101/2025.11.18.689013v1
18.11.2025 21:32 β π 2 π 2 π¬ 0 π 0If youβve ever wondered why you can inject things into the yolk early and it affects the embryo, this phenomena is the reason it works! π #zebrafish
16.11.2025 14:10 β π 17 π 5 π¬ 0 π 0When I was submitting a few years ago and having a similar problem the solution I was recommended by the GRFP support was close to this, a printed and scanned copy of the official transcript. Dumb workaround, but functional.
07.11.2025 04:37 β π 6 π 2 π¬ 0 π 0Dismantling the Institutional Review Board (IRB), that oversees all human subjects research, is bad. Really bad.
19.10.2025 16:00 β π 1734 π 736 π¬ 25 π 51I find the Record tool (Plugins>Macros>Record) very useful for this, in case it's helpful - do what I need once and then I have some code that is at least a basis for tweaking.
03.10.2025 17:58 β π 1 π 0 π¬ 1 π 0(1/8) Very Happy to share our labβs 3D post-implantation human embryo model, made via signalling reprograming!
π Huge thanks to the entire team and our collaborators, special shout-out to @cc0447.bsky.social (led the work) and @jinjin-0101.bsky.social (comp. analysis).
www.cell.com/cell-stem-ce...
YO, what's up with all these almost-witchcraft techniques?? In this paper, they develop a way to freeze cells so quickly that it preserves Calcium waves midway!! WHAT??? HELLO??? So now you can do 3D reconstruction of calcium waves with just a normal confocal. www.nature.com/articles/s41...
26.08.2025 21:08 β π 75 π 15 π¬ 2 π 3Our latest: We developed a chemo-optogenetic system for precise spatiotemporal control of morphogen production. Using dual light + small molecule control of Sonic Hedgehog production, we recapitulated neural tube patterning in vitro & measured spread of Shh
π§΅
www.sciencedirect.com/science/arti...
"WASHINGTON, D.C. (August 1, 2025) β The Corporation for Public Broadcasting (CPB) announced today that it will begin an orderly wind-down of its operations"
cpb.org/pressroom/Co...
Brain Surfaces of 70 primate species
1
To predict the behaviour of a primate, would you rather base your guess on a closely related species or one with a similar brain shape? We looked at brains & behaviours of 70 species, youβll be surprised!
π§΅Thread on our new preprint with @r3rt0.bsky.social , doi.org/10.1101/2025...
(1/10)
I am excited to finally share our work on avian left/right symmetry breaking with you. We reveal a tissue-scale active torque dipole generated at the Hensenβs node, thanks to crazy experiments by Julia @juliapfanzelter.bsky.social and some analysis by me.
doi.org/10.1101/2025...
3D reconstruction of a human Carnegie stage 9 embryo provides a snapshot of early body plan formation www.sciencedirect.com/science/arti...
08.07.2025 22:21 β π 2 π 1 π¬ 0 π 0Have you ever thought about inflating tissues?
Or maybe quickly deflating those inflated tissues?
New #EpithelialMechanics pre-print: doi.org/10.1101/2025...
π§΅ with pressure control, multiscale buckling, controlled wrinkling
While helping out on a cool genomics project recently, I came to realise Iβd been taught a pretty big inaccuracy about the events that occur at fertilization. I suspect that almost everyone reading this has the same misapprehension, so letβs do some learning together: 1/
30.05.2025 18:51 β π 98 π 40 π¬ 2 π 5Beautiful work from @santoslab.bsky.social
A 3D model of human amnion from hESCs
These recapitulate amniotic sac development, revealing GATA3 as key amniogenesis driver & autoregulatory BMP/Wnt feedback loops
And check out the size of them in the video
www.cell.com/cell/fulltex...
Our chromosome-scale genome assembly of Nanomia septata, a siphonophore - doi.org/10.1101/2025... . Much larger than many other cnidarian genomes, fewer chromosomes, and highly rearranged. No smoking gun for how they achieve complex colony-level organization. Great work Namrata Ahuja and friends!
13.05.2025 19:46 β π 48 π 11 π¬ 1 π 0How can biological systems anticipate future events? In our new paper with @jordiplam.bsky.social, we show how a simple genetic circuit can predict future trends through a simple (and perhaps widespread) mechanism @drmichaellevin.bsky.social @koseskalab.bsky.social www.biorxiv.org/content/10.1...
28.04.2025 22:42 β π 97 π 29 π¬ 5 π 3Seconding this! Definitely reach out to Mo!
03.04.2025 17:15 β π 2 π 0 π¬ 0 π 0N2B27 media formulations influence gastruloid development https://www.biorxiv.org/content/10.1101/2025.03.15.643474v1
17.03.2025 04:30 β π 8 π 4 π¬ 0 π 1Our next western/evening π session seminar is happening next week! Join us to learn about
human embryo models with @bailweatherbee.bsky.social
and
pancreatic organoids with @amandaanderssonr.bsky.social
ποΈ Thursday, February 20th at
β° 09:30 PST / 12:30 EST / 17:30 UTC / 17:30 GMT / 18:30 CET
an email that says "Sarah, One of the hats I wear is secretary of a cub scout pack. We have a space themed Blue and Gold celebration coming up and were expecting an NASA astronaut to be able to talk to us. With everything *waves hands crazily* this unfortunately feel through. Is there someone space themed (Astronomer, astrophysicist etc) that you could put us in touch with. The talk would HAVE to be Feb 24th, at approximately 6:30 pm Eastern (During our pack meeting). thanks for any help in this matter. Regards"
We have a CUB SCOUT EMERGENCY.
Space people, anybody able to help here?
Using social media for this bc
1) urgent
2) at a specific date and time
@philplait.bsky.social @astrochic73.bsky.social @astrokatie.com
The placenta is unlikely to generate blood-forming hematopoietic stem cells (HSCs). This schematic shows how, in mouse embryos, Hoxa13-Cre lineage tracing labels virtually all endothelial cells within the mouse placenta. However, virtually no HSCs are labeled by Hoxa13-Cre. This suggests that the placenta is unlikely to form HSCs. Rather, these results suggest that HSCs are produced elsewhere in the developing embryo and subsequently migrate to the placenta, which serves as a landing pad for HSCs.
Is the placenta is a source of, or merely a niche for, blood-forming #hematopoietic #StemCells? This Primer explores a @plosbiology.org study showing that the placenta does not directly give rise to hematopoietic stem cells. π§ͺ Paper: plos.io/4hl3qZF Primer: plos.io/40R1VeE
07.02.2025 10:18 β π 21 π 4 π¬ 0 π 0Announcing this upcoming conference:
GASTRULATION RELOADED:
Developing, engineering, and evolving the body plan
Join us as we explore the latest research on gastrulation and axis formation/elongation, featuring common, exotic, and synthetic embryos!
π
14β17 October 2025
π Paris, France
It's actually theft of taxpayers money when websites go dark. We paid for that data
01.02.2025 00:55 β π 22864 π 4570 π¬ 226 π 991/3 Embryogenesis requires fit cells. Here, following work from @miguel-torres-1963.bsky.social & @tristanrodriguez72.bsky.social and led by @joshifrenster.bsky.social we develop a #gastruloid model of #CellCompetition
www.biorxiv.org/content/10.1...
showing it recapitulates much of the embryo π§΅
Excited to present our new preprint clarifying forebrain developmental organisation. Complex growth patterns shape the forebrain but distort the A-P + D-V axes, hence prior confusion over brain layout. Big love for chicken embryos, simpler to interpret than mouse π£1/3 www.biorxiv.org/content/10.1...
13.01.2025 15:36 β π 9 π 4 π¬ 1 π 0For some time now weβve been aware that Chiron #gastruloids, while representing well axial elongation, exhibit a shortage of anterior fates. Here www.biorxiv.org/content/10.1...
@Dias and colleagues uncover the reason and explain the implications for our understanding of mammalian gastrulation
π§΅
Figure 1 (B) Top: protocol used for the data shown in C-E. Bottom: confocal maximum projections showing unconstrained and micropatterned (ΞΌPatterns) cultures. Notice some variability between colonies, likely due to initial differences in seeding density across the well. The colony shown in C is indicated with a yellow outline. Scale bar: 200β Β΅m.
In vitro modelling of anterior primitive streak patterning with human pluripotent stem cells identifies the path to notochord progenitors
Read this #OpenAccess Research Article by Miguel Robles-Garcia, Guillaume Blin and colleagues @edinburgh-uni.bsky.social:
https://buff.ly/3ZMtzc6
Modelling co-development between somites and neural tube with human Trunk-like Structures (hTLS) https://www.biorxiv.org/content/10.1101/2024.12.16.628661v1
18.12.2024 06:32 β π 6 π 1 π¬ 0 π 1In toto analysis of multicellular arrangement reduces embryonic tissue diversity to two archetypes that require specific cadherin expression https://www.biorxiv.org/content/10.1101/2024.12.06.626808v1
11.12.2024 08:31 β π 1 π 1 π¬ 0 π 0