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Mark Fortner

@markfortner.bsky.social

CEO @ https://aspen.bio, bioinformatics, cheminformatics, cancer research, AI in Drug Discovery, Research Project & Portfolio Management, FAIR data, semantic web, web components, java, groovy, genomics, proteomics, DEL, TPDs, Pancreatic Cancer

440 Followers  |  631 Following  |  628 Posts  |  Joined: 13.11.2024  |  1.4664

Latest posts by markfortner.bsky.social on Bluesky

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How volcanoes helped spark the Black Death Volcanic eruptions in the mid-1340s triggered a chain of events that brought the Black Death to Europe.
05.12.2025 17:44 β€” πŸ‘ 28    πŸ” 8    πŸ’¬ 0    πŸ“Œ 3
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AI Finally Takes On a Century-Old Cancer Mystery EMBL researchers have created a new AI tool that uses a β€œmolecular laser tag” approach to identify cells capable of revealing the earliest origins of cancer. The human body depends on accurate genetic...

#AI Finally takes on a century old #cancer mystery

05.12.2025 15:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Driving in Van Gogh’s footsteps: the 1907 book that imagined a dream art pilgrimage Writer Octave Mirbeau, an early owner of a Sunflowers painting, titled his fictional travelogue "628-E8"β€”after his car’s own licence plate

Driving in Van Gogh's footsteps: the 1907 book that imagined a dream at pilgrimage | #art #VanGogh

05.12.2025 15:35 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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This Cellular Trick Helps Cancer Spread, but Could Also Stop It New research reveals that cells can sense far beyond their immediate surroundings, a biological ability once thought to belong mainly to abnormal or migrating cancer cells.

The cellular trick helps #cancer spread, but could also stop it

05.12.2025 15:27 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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His lab was humming with discovery. After one year under Trump, it’s almost silent John Quackenbush built a lab that is at the forefront of human genetics research and bioinformatics. Trump administration cuts have put it in danger of collapse.

His lab was humming with discovery. After one year under Trump, it's almost silent

05.12.2025 15:12 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Scientists Just Discovered How to Wipe Out the World’s Deadliest Infectious Disease Turning off the genetic switch to its respiratory system might finally eliminate the bacteria behind tuberculosis.

Scientists Just Discovered How to Wipe Out the World's Deadliest Infectious Disease

05.12.2025 14:57 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Fungal Molecule Shows Promise Against Brain Cancer - Neuroscience News For the first time, chemists have fully synthesized verticillin A, a notoriously complex fungal molecule with striking anticancer potential.

Fungal Molecule Shows Promise Against Brain Cancer | #cancer

05.12.2025 14:49 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Plastic can be programmed to have a lifespan of days, months or years Inspired by natural polymers like DNA, chemists have devised a way to engineer plastic so it breaks down when it is no longer needed, rather than polluting the environment

Inspired by natural polymers like DNA, chemists have devised a way to engineer plastic so it breaks down when it is no longer needed, rather than polluting the environment

04.12.2025 21:48 β€” πŸ‘ 16    πŸ” 5    πŸ’¬ 2    πŸ“Œ 1
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Decay of driver mutations shapes the landscape of intestinal transformation - Nature The order in which driver mutations of colorectal cancer occur in intestinal epithelium can determine whether clones are positively or negatively selected and can shape subsequent tumour development.

Nature research paper: Decay of driver mutations shapes the landscape of intestinal transformation

go.nature.com/49VIh7w

03.12.2025 18:12 β€” πŸ‘ 14    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
This is figure 4, which shows that popEVE finds evidence for 123 novel candidate genes in severe developmental disorders

This is figure 4, which shows that popEVE finds evidence for 123 novel candidate genes in severe developmental disorders

A paper in Nature Genetics presents popEVE, a proteome-wide deep generative model to identify and predict pathogenicity of missense mutations causing genetic disorders. go.nature.com/44xoZSh 🧬 πŸ§ͺ

26.11.2025 17:36 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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With Phase 3 Duchenne success, Capricor plots path forward after FDA rejection Capricor's cell therapy deramiocel met Phase 3 endpoints for Duchenne muscular dystrophy, showing promise after FDA's July rejection. Company plans to resubmit for approval.

Capricor moves forward after FDA rejection with Phase 3 Duchenne success.
endpoints.news/with-phase-3...

03.12.2025 19:21 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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We now have a greater understanding of how exercise slows cancer Tumour growth is reduced by exercise due to a shift in the body’s metabolism that means muscle cells outcompete cancer cells in the race to get sugar to grow

Tumour growth is reduced by exercise due to a shift in the body’s metabolism that means muscle cells outcompete cancer cells in the race to get sugar to grow

01.12.2025 22:37 β€” πŸ‘ 112    πŸ” 45    πŸ’¬ 1    πŸ“Œ 7
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Undersea β€˜storms’ are melting the β€˜doomsday’ glacier’s ice shelf Spinning vortices of water trapped under the Thwaites glacier ice shelf account for 20 per cent of the ice melt. They’re expected to get worse as the world warms

Spinning vortices of water trapped under the Thwaites glacier ice shelf account for 20 per cent of the ice melt. They’re expected to get worse as the world warms

01.12.2025 23:21 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Your brain undergoes four dramatic periods of change from age 0 to 90 Our brain wiring seems to undergo four major turning points at ages 9, 32, 66 and 83, which could influence our capacity to learn and our risk of certain conditions

Our brain wiring seems to undergo four major turning points at ages 9, 32, 66 and 83, which could influence our capacity to learn and our risk of certain conditions

02.12.2025 01:08 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0

As with Shakespeare, I always found myself coming out of a Stoppard play feeling more intelligent than when I went in.

02.12.2025 15:02 β€” πŸ‘ 42    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
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Exclusive: Trial Library raises $10M to sell clinical trial matching to insurers Trial Library raises $10M Series A to match patients with clinical trials, uniquely targeting insurers with navigator-supported service, says CEO Hala Borno

Clinical trials are about to become accessible to more patients: Trial Library has raised $10M as it begins offering its services to insurers, an uncommon move so far.

02.12.2025 17:41 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Plastic can be programmed to have a lifespan of days, months or years Inspired by natural polymers like DNA, chemists have devised a way to engineer plastic so it breaks down when it is no longer needed, rather than polluting the environment

Inspired by natural polymers like DNA, chemists have devised a way to engineer plastic so it breaks down when it is no longer needed, rather than polluting the environment

02.12.2025 18:43 β€” πŸ‘ 13    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1
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Alzheimer's Clinical Trial Results, Sadly Running True to Form

Still more Alzheimer’s ideas appear to be in the process of biting the dust:

02.12.2025 19:53 β€” πŸ‘ 34    πŸ” 8    πŸ’¬ 2    πŸ“Œ 4
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Exclusive: ARCH, Parker Institute build next big oncology bet with suite of programs and startup acquisition Medici recently acquired Nutcracker Therapeutics, and CSO Ira Mellman leads a list of big names involved with the company.

Exclusive: Medici Therapeutics β€” backed by ARCH and the Parker Institute β€” has quietly acquired Nutcracker and built a broad oncology pipeline with some of the field’s biggest names.

02.12.2025 20:07 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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We now have a greater understanding of how exercise slows cancer Tumour growth is reduced by exercise due to a shift in the body’s metabolism that means muscle cells outcompete cancer cells in the race to get sugar to grow

Tumour growth is reduced by exercise due to a shift in the body’s metabolism that means muscle cells outcompete cancer cells in the race to get sugar to grow

03.12.2025 05:29 β€” πŸ‘ 14    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0
Drug repurposing resources

Drug repurposing resources

For readers interested in drug repurposing, this article overviews computational approaches to drug repurposing and evaluates available in silico resources
rdcu.be/eSY57
www.nature.com/articles/s41...

03.12.2025 15:06 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Cheap Computation of Small Peptide Binders

How well does free software work to design peptide binders? It depends:

03.12.2025 15:09 β€” πŸ‘ 20    πŸ” 3    πŸ’¬ 1    πŸ“Œ 2
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New Nasal Nanodrops Eradicate Brain Tumors in Mice A nasal nanotherapy triggers a potent immune assault on glioblastoma and eradicates tumors in mice.

New Nasal Nanodrops Eradicate Brain Tumors in Mice | #cancer

30.11.2025 14:56 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Parkinson's Link to Gut Bacteria Suggests Unexpectedly Simple Treatment Researchers have suspected for some time that the link between our gut and brain plays a role in the onset of Parkinson's disease.

Parkinson's Link to Gut Bacteria Suggests Unexpectedly Simple Treatment| #ParkinsonsDisease

26.11.2025 15:00 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Scientists identify 168 chemicals that could be toxic for gut health UK scientists tested more than 1,000 chemicals on gut bacteria samples in a lab, and identified 168 that appear harmful.

UK scientists tested more than 1,000 chemicals on gut bacteria samples in a lab, and identified 168 that appear harmful.

26.11.2025 14:16 β€” πŸ‘ 15    πŸ” 12    πŸ’¬ 1    πŸ“Œ 0
Proposed mechanism of receptor-dependent activity of bitopic ligands. Structures of PTHR1 and A2AR used in this panel were generated using Alphafold2.

Proposed mechanism of receptor-dependent activity of bitopic ligands. Structures of PTHR1 and A2AR used in this panel were generated using Alphafold2.

Bitopic ligands comprise a #pharmacophore & a linked moiety that bind to separate sites. @rche54.bsky.social &co show that #GPCRs that bind small molecules can be potently activated by #bitopic #nanobody -ligand conjugates to selectively target pairs of GPCRs @plosbiology.org πŸ§ͺ plos.io/4p3VOyH

25.11.2025 17:30 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Expanding the drug target universe
YouTube video by Scripps Research Expanding the drug target universe

An interesting talk by Ben Cravatt at Scripps | #chemsky #DrugDiscovery #DrugTargets

25.11.2025 16:15 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Atlas Venture Year in Review 2025 - B. Booth
YouTube video by Atlas Venture Atlas Venture Year in Review 2025 - B. Booth

Atlas Ventures Year in Review:2025 | #vc #biotech

25.11.2025 16:09 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Gemini 3 Prompting Best Practices | #AI #Gemini #Google

25.11.2025 15:44 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Hmm. I guess this was just an accident of timing. @gilman.bsky.social

25.11.2025 15:13 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

@markfortner is following 20 prominent accounts