Peer Community Journal

Brain on Pause: How Sedentary Behavior Impacts Inhibitory Control Across Life Lebon, Florent1, 2  ; Bertrand, Mathilde Fiona3; Genand, Boris1; Mourey, France1 ; Ruffino, Célia4; Papaxanthis, Charalambos1 ; Gaveau, Jeremie1 ; Rozand, Vianney1 1 Cognition, Action, et Plasticité…

Now published in Peer Community Journal, #neuroscience section: Brain on Pause: How Sedentary Behavior Impacts Inhibitory Control Across Life

Superficial layers in M1 and beyond: Neural evidence of cortical and spinal activation during imagined movements Lebon, Florent1, 2   ; Neige, Cecilia3 1 LIBM, Université Claude Bernard Lyon 1, LIBM, Inter-University Laboratory of Human Movement Biology, UR 7424, F-69622, Villeurbanne, France 2 Institut…

Now published in Peer Community Journal, #Health and #Movement Sciences section:
Superficial layers in M1 and beyond: Neural evidence of cortical and spinal activation during imagined movements

Comparative genomics of Rickettsiella bacteria reveal variable metabolic pathways potentially involved in symbiotic interactions with arthropods Floriano, Anna M.1  ; El-Filali, Adil1 ; Amoros, Julien2 ; Buysse, Marie2 ; Jourdan-Pineau, Hélène3, 4 ; Sprong, Hein5 ; Kohl, Robert5; Dirks, Ron P.6 ; Schaap, Peter7, 8 ; Koehorst, Jasper7, 8 ;…

Now published in Peer Community Journal, #evolutionarybiology section:
Comparative genomics of Rickettsiella bacteria reveal variable metabolic pathways potentially involved in symbiotic interactions with arthropods
buff.ly/SV5ZHaK

Data mining of public genomic repositories: harnessing off-target reads to expand microbial pathogen genomic resources Richard, Damien1  ; Poulicard, Nils1 1 PHIM Plant Health Institute, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France

Now published in Peer Community Journal, #infections section: Data mining of public genomic repositories: harnessing off-target reads to expand microbial pathogen genomic resources

Disease severity in coinfected hosts: the importance of infection order Dusuel, Aloïs1, 2; Bourbon, Luc3; Groetz, Emma1, 2; Pernet, Nicolas4; Rialland, Mickaël1, 2; Roche, Benjamin5, 6; Faivre, Bruno3; Sorci, Gabriele3 1 CTM - Center for Translational and Molecular…

Now published in Peer Community Journal, #infections section: Disease severity in coinfected hosts: the importance of infection order

Population shifts in begomoviruses associated with tomato yellow leaf curl disease in western Mediterranean countries Granier, Martine1, 2 ; Faize, Mohamed3 ; Passera, Sandie4; Urbino, Cica1, 2 ; Peterschmitt, Michel1, 2 1 CIRAD, UMR PHIM, F-34398 Montpellier, France 2 PHIM, Univ Montpellier, CIRAD, INRAE, Institut…

Now published in Peer Community Journal, #infections section: Population shifts in begomoviruses associated with tomato yellow leaf curl disease in western Mediterranean countries

hdmax2, an R package to perform high dimension mediation analysis Pittion, Florence1 ; Jumentier, Basile2; Nakamura, Aurélie3 ; Lepeule, Johanna3 ; François, Olivier1, 4 ; Richard, Magali1, 4 1 Translational Innovation in Medicine and Complexity / Recherche…

Now published in Peer Community Journal, #genomics section: hdmax2, an R package to perform high dimension mediation analysis

Last Friday, we published the 500th article of Peer Community Journal! 🥳

HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids Rio, Simon1, 2  ; Abdallah, Sophie1, 2 ; Durand, Théo1, 2; D'Hont, Angélique1, 2 ; Garsmeur, Olivier1, 2 1 CIRAD, UMR AGAP Institut, F-34398 Montpellier, France 2 UMR AGAP Institut, Univ Montpellier,…

Now published in Peer Community Journal, #genomics section: HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids

The potential of attractive insecticide-treated nets (ITNs) in reducing malaria transmission: a modeling study Moiroux, Nicolas1, 2  ; Pennetier, Cédric1 1 MIVEGEC, IRD, CNRS, Univ. Montpellier - Montpellier, France 2 Pôle de Zoologie Médicale, Institut Pasteur Dakar - Dakar, Sénégal

Now published in Peer Community Journal, #infections section: The potential of attractive insecticide-treated nets (ITNs) in reducing malaria transmission: a modeling study

Individual or collective treatments: how to target antimicrobial use to limit the spread of Mannheimia haemolytica among beef cattle? Sorin-Dupont, Baptiste1  ; Poyard, Antoine 1; Assié, Sebastien1 ; Picault, Sebastien 1 ; Ezanno, Pauline1 1 Oniris, INRAE, BIOEPAR, 44300, Nantes, France

Now published in Peer Community Journal, #animalscience section:
Individual or collective treatments: how to target antimicrobial use to limit the spread of Mannheimia haemolytica among beef cattle?

The value of local allometries from airborne laser scanning for tropical forest biomass estimates Huertas, Claudia1   ; Fischer, Fabian Jörg 2  ; Aubry-Kientz, Mélaine1 ; Ball, James3 ; Derroire, Géraldine4 ; Vincent, Grégoire1 1 AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier,…

Now published in Peer Community Journal, #ecology section: The value of local allometries from airborne laser scanning for tropical forest biomass estimates

A novel quantile regression approach to define optimal ecological niche: a case study on habitat suitability of cockle populations (Cerastoderma edule) Lehuen, Amélie1, 2  ; Dancie, Chloé3; Grasso, Florent4 ; Smolders, Sven5; Cozzoli, Francesco6, 7 ; Orvain, Francis1, 2 1 Marine Ecosystems and oRganisms reSEArch Lab, Esplanade de la Paix – CS 14032…

Now published in Peer Community Journal, #ecology section: A novel quantile regression approach to define optimal ecological niche: a case study on habitat suitability of cockle populations (Cerastoderma edule)

A Julia toolkit for species distribution data Poisot, Timothée1  ; Bussières-Fournel, Ariane1; Dansereau, Gabriel1 ; Catchen, Michael D.1 1 Université de Montréal, Département de Sciences Biologiques, Montréal QC, Canada

Now published in Peer Community Journal, #ecology section: A Julia toolkit for species distribution data

EnVhogDB: an extended view of the viral protein families on Earth through a vast collection of HMM profiles Rubén, Pérez-Bucio1, 2; Enault, François1  ; Galiez, Clovis2 1 Université Clermont Auvergne, CNRS, LMGE, F-63000 Clermont-Ferrand, France 2 Univ. Grenoble Alpes, CNRS, Grenoble INP, LJK, 38000…

Now published in Peer Community Journal, #Microbiology section: EnVhogDB: an extended view of the viral protein families on Earth through a vast collection of HMM profiles
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Sustainable diets: Links between knowledge, motivations and eating practices. Chene, Oriane1  ; Chambaron, Stéphanie1 ; Arvisenet, Gaëlle1 ; Dujourdy, Laurence2, 3 1 Université Bourgogne Europe, Institut Agro, CNRS, INRAE, UMR CSGA, 21000 Dijon, France 2 Institut Agro Dijon,…

Now published in Peer Community Journal, first article of the new #nutrition section: Sustainable diets: Links between knowledge, motivations and eating practices

Long term trend and short-term dynamics of a willow ptarmigan population Willebrand, Tomas1  ; Hörnell-Willebrand, Maria1 ; Brittas, Rolf2; Kleiven, Eivind Flittie3 1 Department of Forestry and Wildlife Management, Faculty of Applied Ecology and Agricultural Sciences,…

Now published in Peer Community Journal, #ecology section: Long term trend and short-term dynamics of a willow ptarmigan population

Population structure and genetic diversity of the Critically Endangered bowmouth guitarfish (Rhina ancylostomus) in the Northwest Indian Ocean Kipperman, Marja J.1  ; Jabado, Rima W.2, 3 ; Haque, Alifa Bintha4, 5 ; Fernando, Daniel6 ; Anjani, P.A.D.L6; Spaet, Julia L.Y.7 ; Humble, Emily1 1 Royal (Dick) School of Veterinary Studies and the…

Now published in Peer Community Journal, #evolutionarybiology section: Population structure and genetic diversity of the Critically Endangered bowmouth guitarfish (Rhina ancylostomus) in the Northwest Indian Ocean

Integrating ethnolinguistic and archaeobotanical data to uncover the origin and dispersal of cultivated sorghum in Africa: a genomic perspective Gilabert, Aude1, 2  ; Deu, Monique1, 2 ; Champion, Louis3  ; Cubry, Philippe3  ; Donkpegan, Armel1, 2, 4 ; Rami, Jean-Francois1, 2; Pot, David1, 2 ; Vigouroux, Yves3 ; Leclerc, Christian1, 2 1 CIRAD,…

Now published in Peer Community Journal, #evolutionarybiology section: Integrating ethnolinguistic and archaeobotanical data to uncover the origin and dispersal of cultivated sorghum in Africa: a genomic perspective

Scales of marine endemism in oceanic islands and the Provincial-Island endemism Pinheiro, Hudson T.1  ; Rocha, Luiz A.2 ; Quimbayo, Juan P.3 1 Center for Marine Biology, University of São Paulo, São Sebastião, SP, Brazil 2 California Academy of Sciences, San Francisco, CA, USA 3…

Now published in Peer Community Journal, #ecology section: Scales of marine endemism in oceanic islands and the Provincial-Island endemism

Performance evaluation of adaptive introgression classification methods Romieu, Jules1  ; Camarata, Ghislain1, 2; Crochet, Pierre-André3 ; de Navascués, Miguel2 ; Leblois, Raphaël2 ; Rousset, François1 1 ISEM, Univ Montpellier, CNRS, IRD, Montpellier, France 2 CBGP,…

Now published in Peer Community Journal, #evolutionarybiology section: Performance evaluation of adaptive introgression classification methods

Archaeological Bone Assemblages Trace Changes in Turtle and Tortoise Diversity in Continental Southeast Asia Bochaton, Corentin1  ; Naksri, Wilailuck2; Chantasri, Sirikanya1, 3 ; Maneechote, Melada4; Mithong, Supalak1; Heng, Sophady5; Forestier, Hubert6; Auetrakulvit, Prasit4; Zeitoun, Valéry7;…

Now published in Peer Community Journal, #paleontology section: Archaeological Bone Assemblages Trace Changes in Turtle and Tortoise Diversity in Continental Southeast Asia

Revisiting the systematics of Brevipalpus flat mites (Tenuipalpidae): phylogeny, species groups and cryptic diversity de Mendonça, Renata Santos1, 2 ; Ferragut, Francisco3 ; de Oliveira, Isis Carolina S.2, 4 ; Tassi, Aline Daniele5, 6 ; Fileni, Felipe7 ; Ochoa, Ronald8 ; Navia, Denise9 1 CAPES/PNPD - Faculdade de…

Now published in Peer Community Journal, #zoology section: Revisiting the systematics of Brevipalpus flat mites (Tenuipalpidae): phylogeny, species groups and cryptic diversity

Cigarette smoke exposure as a potential risk factor for sleep problems in pregnant women Ciochoń, Aleksandra1, 2, 3  ; Balwicki, Łukasz 4 ; Klimek, Magdalena 2 ; Danel, Dariusz P.5 ; Apanasewicz, Anna 5 ; Ziomkiewicz, Anna 6 ; Galbarczyk, Andrzej2, 7; Marcinkowska, Urszula M. 2 1…

Now published in Peer Community Journal, #Health and #Movement Sciences section: Cigarette smoke exposure as a potential risk factor for sleep problems in pregnant women

Evolutionary assembly of crown reptile anatomy clarified by late Paleozoic relatives of Neodiapsida Jenkins, Xavier A1, 2, 3  ; Benson, Roger BJ1, 4 ; Ford, David P5, 4; Browning, Claire6; Fernandez, Vincent7, 4; Dollman, Kathleen7, 4; Gomes, Timothy2; Griffiths, Elizabeth8; Choiniere, Jonah N4 ;…

Now published in Peer Community Journal, #paleontology section: Evolutionary assembly of crown reptile anatomy clarified by late Paleozoic relatives of Neodiapsida
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Applying statistical and causal modeling to interpret thermal alteration in observational lithic data Cardillo, Marcelo1   ; Carranza, Eugenia1 1 Instituto Multidisciplinario de Historia y Ciencias Humanas, Consejo Nacional de Investigaciones Científicas y Técnicas (IMHICIHU, CONICET) / Facultad de…

Now published in Peer Community Journal, #archaeology section:
Applying statistical and causal modeling to interpret thermal alteration in observational lithic data

Reaction cleaving and complex-balanced distributions for chemical reaction networks with general kinetics Hoessly, Linard1; Wiuf, Carsten2  ; Xia, Panqiu3 1 Data Center of the Swiss Transplant Cohort Study, University hospital Basel, Switzerland 2 Department of Mathematical Sciences, University of…

Now published in Peer Community Journal, section Mathematical &
#ComputationalBiology: Reaction cleaving and complex-balanced distributions for chemical reaction networks with general kinetics

Effects of dibutyl phthalate (DBP) on life history traits and population dynamics of Daphnia magna: comparison of two exposure regimes Ohanessian, Jérémie1  ; Prud’homme, Sophie Martine1 ; Franklin, Ellis1 ; Kitzinger, Géraldine2; Lorgeoux, Catherine3; Billoir, Elise1 ; Felten, Vincent1 1 Université de Lorraine, CNRS, LIEC, F-57000…

Now published in Peer Community Journal, #ecotoxicology and #environmentalchemistry section: Effects of dibutyl phthalate (DBP) on life history traits and population dynamics of Daphnia magna: comparison of two exposure regimes

fabryka. A web application for easily analysing & exploring the fabric of archaeological assemblages Thomas, Marc1 1 UMR 5608 TRACES, Université Toulouse-Jean Jaurès, Toulouse, France

Now published in Peer Community Journal, #archaeology section: fabryka. A web application for easily analysing & exploring the fabric of archaeological assemblages

Reduced levels of relatedness indicate that great-tailed grackles disperse further at the edge of their range Lukas, Dieter1  ; Blackwell, Aaron D.2; Edrisi, Maryam2; Hardy, Kristin3, 4; LeGrande, Christa1; Marfori, Zara1; McCune, Kelsey B.5, 6; Sevchik, August7, 8; Smith, Caroline2; Logan, Corina J.1, 9 1…

Now published in Peer Community Journal, #ecology section: Reduced levels of relatedness indicate that great-tailed grackles disperse further at the edge of their range