Sharif Islam🐧🎸

Sharif Islam🐧🎸

@sharifx.bsky.social

Data Architect@Naturalis, Leiden, The Netherlands. Biodiversity Informatics | FAIR data | Research Data Management | Distributed Systems| Open Source | Open Science 🐧 https://sharifislam.com

223 Followers 319 Following 95 Posts Joined Dec 2023
5 days ago
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Michael Mann: Yes, we can still stop the worst effects of climate change. Here's why. Opinion: State-of-the-art climate models show warming stops once we stop emitting carbon. That means there's still time to stop the worst impacts of climate change.

Please see this commentary I wrote for @livescience.com that summarizes the current state of knowledge regarding the "zero emissions commitment" (how much warming we expect once emissions decrease to zero). Our best estimate is that the ZEC is very close to 0C:
www.livescience.com/planet-earth...

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6 days ago

great stuff by @davekarpf.bsky.social

"Journal articles aren’t social science. They’re just a unit of measurement. They’re how we keep score. Producing journal articles isn’t what we are actually meant to be doing — we’re supposed to be learning meaningful things about people, power, and society."

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1 week ago
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🆕 The @biogeneurope.bsky.social project - which now gives way to BGE+ - represented a landmark in European research collaboration, bringing together the #DNAbarcoding (@iboleurope.bsky.social) and #reference #genomes (@ergabiodiv.bsky.social) communities.

🔓 Grant Proposal: doi.org/10.3897/rio.....

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1 week ago
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U.S. Strikes in Middle East Use Anthropic, Hours After Trump Ban Within hours of declaring that the federal government will end its use of artificial-intelligence tools made by tech company Anthropic, President Trump launched a major air attack in Iran with the hel...

Wait, so did Claude tell them to bomb a girl’s school?!

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1 week ago

"We want the murder software to murder accurately" isn't the absolution everyone seems to think it is. Anthropic is enacting a huge PR campaign and too many people are helping them

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1 week ago

If you are interesting why these strikes happened right after we received news that the US-Iran talks went reasonably well though without breakthrough, Lord Ricketts has an excellent explainer.

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2 weeks ago
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🆕 Latest research in @dissco.bsky.social's #openscience collection illustrates a Machine Learning as a Service approach for quantitative analysis of #herbarium #specimens.

🌿 Subsequently, DiSSCO's models are used to calculate surface area of identified #plant organs.

🔓 See: doi.org/10.3897/rio....

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1 month ago

it's not just that Mamdani is charming af (he is), it's that he is normalizing the idea that children are full members of society that we all share a collective responsibility for

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1 month ago
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FAIR digital twins for biodiversity: enabling data, model, and workflow integration - npj Biodiversity npj Biodiversity - FAIR digital twins for biodiversity: enabling data, model, and workflow integration

🌿 New paper: "FAIR Digital Twins for biodiversity"
Combining #DigitalTwins with #FAIR principles (Findable, Accessible, Interoperable, Reusable) addresses data fragmentation & model integration using #RO-Crate.
Thanks to co-authors & BioDT team! @horizoneu.bsky.social
📄 doi.org/10.1038/s441...

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2 months ago
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Some big diffs between citizen science observations (from iNaturalist) and specimen records (from digitised museum collections) - cit. sci records biased towards large inverts & exotic spp. Great MSc project with recommendations 🌏🧪@nzhymenoptera.bsky.social www.tandfonline.com/doi/full/10....

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3 months ago
We need to focus less on charismatic species and more on where they live From: Frontiers Scientists call for greater focus on conserving whole ecosystems instead of charismatic species Researchers urge to prioritize ecosystem function in conservation measures of success Conservation programs are often too focused on a single charismatic species, Hai-Tao Shi at...

We need to focus less on charismatic species and more on where they live
->Scimex | #Biodiversity #Species | More from Lil Dr Glen EcoChat at BigEarthData.ai

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3 months ago
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Help the Biodiversity Heritage Library Take Flight After nearly two decades under the Smithsonian Institution, the Biodiversity Heritage Library needs to become fully independent by 1 January 2026. Help #GiveBHLWings this Giving Tuesday and support…

🌿 It’s #GivingTuesday! Help the Biodiversity Heritage Library take flight as we count down to independence on 1 Jan 2026. Your gift helps #GiveBHLWings – keeping 500 years of biodiversity knowledge open & accessible worldwide. #ILoveBHL 🧪 📖 🌏
💚 Donate now:

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3 months ago

Glad to see mention of @orcid.org. FYI: @dissco.bsky.social is working on providing DOI to each digital specimen so attribution can be linked to specimen instead of datasets. Check: disscover.dissco.eu. Also digitalSpecimenID is now an approved TDWG term: github.com/tdwg/dwc/iss... 🪩 #FAIRdata

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3 months ago

Oh! The irony 😂

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3 months ago
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Who and What to Watch as the World Gathers for COP30 Climate Talks The U.S. won't be at the COP30 climate talks, but dozens of governors and mayors will. Here's a guide to who at what to watch.

"A COP is a bit like a potluck dinner," @katharinehayhoe.com said. Each participant brings an offering to the table and "it's obvious who took the time to bake and who dug out the frozen chicken nuggets." 🙃

#COP30

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3 months ago

also. Current tools do different things: GNVerifier=string matching, Wikidata=curated ID links. entity res does MORE. for : relationship graphs, ML from past decisions, network effects (like '10 specimens use spelling A, so specimen 11 with spelling B is likely the same'). Auto-resolution etc.

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3 months ago

it's about the techniques enterprise/industry uses to solve these problems that we can learn/borrow.

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3 months ago

Wikidata does mapping but that's different from entity res. Wikidata: 'these IDs are related/refer to this taxon'. Enterprise entity resolution: 'these messy records are probably the same entity' using probabilistic scoring. What I'm brainstorming (in my post) is that we need both.

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3 months ago

Yes. Maintenance and sustainability always a challenge. So that is why I am trying to look at this from entity resolution instead of another global ID. Ideally there could be many types of these mappings. If banks and companies can do this with customer data why can’t we?? 🧐

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3 months ago
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One Species -> Many IDs: Applying enterprise "Entity Resolution" to Biodiversity Data Here's a crazy idea. What if we treat species identifiers in the biodiversity data landscape the same way commercial organisations treat customers? Hear me out.

Love to hear your thought on this. @rdmpage.bsky.social @dshorthouse.bsky.social @debpaul.bsky.social 🦉 I wrote a post on treating species identifiers with the same rigour as enterprise entity resolution. Not a new idea but we have to think about the scale. www.linkedin.com/pulse/one-sp...

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4 months ago
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A BMD survey gathers input to guide the design of project's online toolbox The BMD project is inviting Europe’s natural site managers to take part in a survey on the monitoring and analysis needs of protected and restored natural sites. The survey seeks input on biodive...

bmd-project.eu/news/new-sur... The @bmd-project.eu is inviting Europe’s natural site managers to take part in a survey on the monitoring and analysis needs of protected and restored natural sites. #Biodiversity #Natura2000 @eea.europa.eu

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4 months ago

So it turns out... the US air travel system was incredibly, deeply dependent on federal funding to just run day-to-day all this time, to the benefit of private airline shareholders, when everyone thinks that state-run trains are leeching off the government. Weird!

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4 months ago

It's brilliant and exciting to see Zohran Mamdani elected.
More leaders like him please, and fewer like Cuomo, Schumer and the rest of the oligarch-pleasing, hope-destroying, election-losing, right-centrist political class.

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4 months ago

Oh! I knew it!! Those Belarusian teens!! 😂

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4 months ago
Homesick on JSTOR Following Hurricane Katrina, the Federal Emergency Management Agency (FEMA) distributed over 120,000 trailers for emergency housing. Produced from engineered wo...

it's also available as open access! www.jstor.org/stable/jj.34...

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4 months ago

Thanks. Adding to my list!

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4 months ago

Jamaica set for post-Melissa payout but experts warn of limits to hurricane insurance.

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4 months ago
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sadnewsletter.substack.com/p/when-neutr...
The #Python Software Foundation recently had to pass on a US$1.5M grant from the National Science Foundation for PyPI maintenance. One condition of the funding was that the they drop any DEI efforts. My thoughts on this.

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4 months ago
My quote from an Axios interview, stating that: People often think of climate change as a separate bucket at the end of a long row of other buckets of problems we're trying to fix that are wrong in the world," Hayhoe told Axios.
This includes poverty, disease and access to clean water.
"Climate change is not a separate bucket," Hayhoe said. "The reason we care about climate change is that it's the hole in every bucket."

If you take the time to read the whole Gates memo (which I did), the bulk of the content was mostly solid and encouraging. Really!

It was the FRAME that was off--very off, from the first line.

And when your framing is off, then how you make decisions and set priorities is off. THAT'S the problem.

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4 months ago

I think part of the issue is that we are taking someone like Bill Gates seriously to advise the world about climate change. It's like how Al Gore created the internet! 🤔 #ClimateChange

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