@lpachter.bsky.social, a Good Human Being who is also a scientist, put it very, very well in a blogpost
08.11.2025 17:05 β π 1 π 0 π¬ 0 π 0@lculibrk.bsky.social
Bioinformagician @NYU Grossman/Perlmutter, previously PhD @UBC. I like climbing pointy things and clicking virtual polygons for fun
@lpachter.bsky.social, a Good Human Being who is also a scientist, put it very, very well in a blogpost
08.11.2025 17:05 β π 1 π 0 π¬ 0 π 0There are many moments when you sit back from your nth Tchaikovsky novel to think "actually this guy simply prints incredible lines"
16.09.2025 14:02 β π 1 π 0 π¬ 0 π 0Assembling the shiv exodia is one of the best feelings
14.09.2025 22:58 β π 1 π 0 π¬ 0 π 0I see you've committed the grave crime of *checks notes* being a woman on the internet.
29.12.2024 00:28 β π 0 π 0 π¬ 0 π 0Maybe keywords in the title triggered some kind of additional checks behind the scenes given the climate around billionaires right now
20.12.2024 16:09 β π 2 π 0 π¬ 0 π 0Favorite example of this was Smith-Waterman in Geology. I believe the anecdote was that they were incidentally walking by a local Geo meeting and saw poster presentations describing the problem, and realized that it was just another application of sequence alignment. The story is all hearsay though
26.11.2024 15:38 β π 1 π 0 π¬ 0 π 0If you're trying to cluster one underlying truth with two different methods, as long as both methods _can_ reach the same defensible answer, does it matter? Correct me if I'm wrong but you're describing how methods can be wrong, which is separate from different methods giving different answers
26.11.2024 05:28 β π 1 π 0 π¬ 1 π 0As a not-scRNA person, is this something that happens when one uses defaults and calls it a day? Can parameter tuning of clustering bring the results in line with the expected/observed biology or are they simply wholly incompatible? As I understand it, scRNAseq analysis is quite iterative
25.11.2024 20:44 β π 2 π 0 π¬ 2 π 0KSP2's history is a constant repeat of "and then it got worse"
18.11.2024 20:00 β π 0 π 0 π¬ 0 π 0Fighting over 2nd place while data.table looks on from the top of the podium?
14.11.2024 19:46 β π 9 π 0 π¬ 0 π 0Considering how many prescient things they did predict, it's not a bad track record though. It makes sense they'd expect brainwaves to be decodable far more easily than in reality
01.11.2024 15:18 β π 2 π 0 π¬ 0 π 0Terminals are actually terminal WHAT
30.10.2024 19:47 β π 4 π 0 π¬ 0 π 0