Quilt with Smith tiles pattern and vibrant colors (left), and its FFT (right).
The code to generate the Smith / Carlson / N6 tiles is adapted from Ned Batchelder's brilliant blog post: nedbatchelder.com/blog/202208/...
Also, here's the picture of the mentioned quilt and its FFT!
21.07.2025 23:10 β π 1 π 0 π¬ 0 π 0
a 2x3 grid of Smith / Carlson / N6 tiles (top) and their corresponding FFT (bottom). The patterns exhibit considerable amount of diffuse scattering.
Went to a cool BAMPFA exhibit this weekend, on African American quilt making! Recognized one of the patterns as a Truchet tiling, and wanted to know what its FFT would look like. Would the symmetry pop up? Would the diffuse scattering??
That led to this fun exploration of Smith/Carlson/N6 tilings π§ͺ
21.07.2025 22:50 β π 2 π 0 π¬ 1 π 0
This fully-funded 4-yr PhD is part of a broader collaboration with ASML, ARCNL, and TU Delft, combining computational imaging, BSE/SE modeling, and inverse algorithms for high-res, low-voltage SEM!
#SEM #phd #computationalimaging #electronmicroscopy #curiousbeams @imphys-tudelft.bsky.social
03.07.2025 12:19 β π 0 π 0 π¬ 0 π 0
PhD Position Developing Diffractive Imaging in Scanning Electron Microscopy for Inspection/Metrology
PhD Position Developing Diffractive Imaging in Scanning Electron Microscopy for Inspection/Metrology
π¨ Weβre hiring!
Join the Curious Beams Lab at TU Delft as one of our first PhDs and help develop the next generation of diffractive imaging in SEM β pushing surface-sensitive nanoscale characterization to new limits π¬π§ͺ
Please repost & share with your network! π
careers.tudelft.nl/job/Delft-Ph...
03.07.2025 12:19 β π 1 π 1 π¬ 1 π 0
Curious Beams Lab Logo: Converged electron probe revealing a nanobeam diffraction pattern, in the style of an engineering drawing blueprint.
Introducing the Curious Beams Lab β where we use electron beams and advanced algorithms to image the structure and function of materials at the nanoscale π¬
PhD & postdoc openings coming soon β stay tuned!
#TUDelft #ElectronMicroscopy #ComputationalImaging
23.06.2025 16:26 β π 5 π 3 π¬ 0 π 1
Thrilled to finally share that I'll be joining TU Delft this fall as an Assistant Professor in the Imaging Physics department ππΌ Excited to join such a vibrant, cross-disciplinary community and grateful to the mentors and colleagues who've supported me along the way ππΌ
@imphys-tudelft.bsky.social
23.06.2025 16:26 β π 8 π 0 π¬ 4 π 0
The main takeaway is that formulating it this way, it follows that tcBF/parallax is a quadratic approximation to phase-compensated SSB (upsampling then follows naturally from that).
12.06.2025 20:20 β π 1 π 0 π¬ 0 π 0
The formalism in-fact is slightly different, looping over the virtual BF images instead of spatial frequencies.
Pseudocode and discussion here: www.elementalmicroscopy.com/articles/EM0...
and full code here:
github.com/ophusgroup/q...
12.06.2025 20:20 β π 1 π 0 π¬ 1 π 0
Haha, indeed -- if only we had a better name for "phase-compensated" SSB (meaning using the complex-valued aperture overlap gamma function, here doi.org/10.1016/j.ul...).
12.06.2025 20:20 β π 0 π 0 π¬ 2 π 0
Split figures are great for papers. For talks, interactive sliders are better π
Here, demoing the upsampling capabilities of tilt-corrected BF STEM and direct ptychography on a beam-sensitive MOF dataset!
elementalmicroscopy.com/articles/EM0... π§ͺπ¬
12.06.2025 16:06 β π 3 π 0 π¬ 1 π 0
Super proud of this work, which showcases modern scientific publishing for open science π§ͺ
Inspired by the insights of the interactive CTF widgets, we propose a novel phase-retrieval algorithm which achieves robust information transfer on sub-sampled datasets π
@elementalmicrosc.bsky.social
14.05.2025 23:10 β π 3 π 3 π¬ 1 π 0
Hey there π¦π§ͺ, we're a new open access microscopy journal and wanted to introduce ourselves! EM aims to modernize scientific publishing for microscopy, by prioritizing open science, transparency, and accessibility and using open-source formats and interactive notebooks π
@curvenote.com @mystmd.org π
02.02.2025 11:04 β π 10 π 10 π¬ 1 π 0
Attending the APMC 2025 in Brisbane, and interested in learning how to simulate and analyze 4D-STEM data? There's still time to register for the 4D-STEM workshop and learn about strain and orientation mapping, differential phase contrast, ptychography, and more!
www.apmc13-2025.org/conference-w...
24.01.2025 05:23 β π 2 π 0 π¬ 0 π 0
Needed to demonstrate this fun example of solving Sudoku puzzles with projection set algorithms for a workshop I'm teaching. Continuously impressed with how easy it is to get to a working demo with wasm + @marimo.io slides π π§ͺ
marimo.io/p/@gvarnavid...
10.01.2025 12:40 β π 1 π 0 π¬ 0 π 0
Monday 9th 15:00 Open Science Pavilion - Big Screen, Exhibit Hall
Join @row1.ca for a session on Publishing Computational Research Session
#OpenScience #Jupyter @mystmd.org
06.12.2024 20:22 β π 8 π 3 π¬ 1 π 2
Cal bears logo made from illuminated dots on a black background.
π§ͺConstrained optimization tiling of the Cal bears logo, using simulated differential phase-contrast imaging of strontium titanate atoms.
π¬ Captured for @molecularfoundry.bsky.social #Nano Art Contest.
π· Georgios Varnavides, @ucberkeleyofficial.bsky.social
More: foundry.lbl.gov/2024/10/21/a...
26.11.2024 23:00 β π 30 π 4 π¬ 1 π 0
Hello π§ͺπ¦ New here, so figured Iβd introduce myself! Iβm a postdoctoral researcher @berkeleylab.bsky.social exploring the mesmerizing corners of diffractive imaging β¨
Short clip of my new favourite teaching demo: nanofabricated Fourier atlas by @hovden.bsky.social lab π
πΈ: @juliedactyl.bsky.social
19.11.2024 16:56 β π 5 π 1 π¬ 0 π 0
Algorithms, Software and Systems for Cryo-EM. Makers of CryoSPARC.
Materials scientist & engineer; Director of the UCL Institute of Making; Author of New York Times best selling book Stuff Matters and others; Occasional BBC TV/radio presenter.
We measure the attention that research outputs receive from policy documents, mainstream news outlets, Wikipedia, social media and online reference managers. We detect sentiment of Bluesky/X posts.
Come for the attention to research. Stay for the memes.
The MRC Laboratory of Molecular Biology aims to understand biological processes at the molecular level to help tackle human health problems and disease.
Engineer/scientist, Nobel Prize in Chemistry 2018
I love evolution, enzymes, protein engineering, AI
Linus Pauling Professor at Caltech
At the Electron Microscopy Science Technology Platform at the Francis Crick Institute. Imaging life at the nanoscale with innovative new tech and citizen science.
The Nogales Lab @ UC Berkeley. #CryoEM #Transcription #Microtubules #ChromatinModification Bluesky account managed by lab members.
Kavli Institute of Nanoscience Delft |
Associate Professor @Delft University of Technology | https://cryoem.tudelft.nl
Interested in #cryoEM & #cryoET methods, #membranes, intracellular/innate #immunity.
Joint Head of Structural Studies at @mrclmb.bsky.social. Develops & uses #cryoEM to study amyloids in neurodegeneration. #tau, #alphasynuclein, #opensoftware, #RELION. All opinions my own.
CryoFIB Development and In situ structural biology. NPC and TE enthusiast. Drosophilist but ready to switch to wherever biology takes me
Professor, Head of the βIntegrative Structural Cell Biologyβ unit at Institut Pasteur, Paris
The funder-researcher collaboration and open-access publisher for research in the life and biomedical sciences.
Follow @eLifeCommunity.bsky.social
Operated by @shervinnia.bsky.social and inspired by the now-defunct bot by FrΓ©dΓ©ric Poitevin and @gati.bsky.social. Suggestions welcome.
PhD student in @landerlab.bsky.social at Scripps Research interested in time-resolved cryo-EM π©βπ¬βοΈ
Postdoctoral researcher at MRC Laboratory of Molecular Biology | cellular cryoET & software | Ais aiscryoet.org | Pom cryopom.streamlit.app | πΊ
Grad student, Structural biologist / Cryo-EM π¬/ TGF-Beta family & Anti-MΓΌllerian Hormone / SEBM Trainee Councillor
irish | membrane protein enthusiast @ ucph | she/her
π Ph.D. Student, Zoology | UBC.
π¦ Evolutionary Virology + One Health Genomics.
π¬Scientific + Biological Illustrator.
π³οΈβπ Co-Founder: 500QueerSci.
π Vancouver, BC // LA native.
π .
IG: @ThePenAndThePangolin
http://www.thepenandthepangolin.com/