💬 Joint first authors @ievarau.bsky.social and @damlaob.bsky.social remark:
“This release marks a major milestone for JASPAR. Deep learning models now sit alongside the classical collections, letting researchers build on two decades of curated knowledge while harnessing modern computational power.”
02.12.2025 07:37 — 👍 3 🔁 1 💬 1 📌 0
🔍 What’s new?
For the first time, JASPAR now hosts a Deep Learning Collection running alongside its trusted classical PFM-based motif collections. This marks a transformative step in how researchers can explore transcription factor (TF) binding and gene regulation.
02.12.2025 07:37 — 👍 2 🔁 1 💬 1 📌 0
My group @biovitenskap.bsky.social is #hiring a Post-doc in bioinformatics and biostatistics to work on #epigenetic memory in stem cells and during cell reprogramming. The position is co-supervised by @amathelier.bsky.social from @nordicembl.bsky.social
22.01.2025 04:56 — 👍 11 🔁 12 💬 2 📌 0
Postdoctoral Research Fellow in Computational Biology and Epigenetics (273869) | University of Oslo
Job title: Postdoctoral Research Fellow in Computational Biology and Epigenetics (273869), Employer: University of Oslo, Deadline: Friday, February 28, 2025
We are #hiring a postdoc to study the epigenetic imprinting of cell fate during adipogenesis.
Cool interdisciplinary project to analyze ChIP-seq, ATAC-seq, Hi-C, and CAGE. The postdoc will be co-supervised by @chymkowitchlab.bsky.social and me.
Spread the word!
www.jobbnorge.no/en/available...
21.01.2025 19:35 — 👍 15 🔁 11 💬 0 📌 3
We want to make JASPAR (jaspar.elixir.no) even better for our users! Please share your experience and help us enhance the database by taking a quick survey: nettskjema.no/a/467842.
Your insights make a difference!
08.01.2025 16:53 — 👍 16 🔁 15 💬 0 📌 3
TFs in plants are very interesting! That includes the names 😅 JASPAR has great collaborators who work and check plant data for each release.
10.01.2025 16:25 — 👍 3 🔁 0 💬 1 📌 0
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Postdoctoral researcher at the Norwegian Centre for Molecular Biosciences and Medicine (NCMBM), University of Oslo
#generegulation #deeplearning
NCMBM, hosted at the University of Oslo, is an international research centre in interdisciplinary molecular biosciences and medicine research. NCMBM is the Norwegian node of the Nordic EMBL Partnership for Molecular Medicine.
www.med.uio.no/ncmbm/english
Studying gene regulation and transcription factor binding with machine learning. Assoc Prof at Penn State. 🇮🇪
Senior Investigator @ Altius Institute for Biomedical Sciences. Research: High-resolution mapping of chromatin structure & function. Fun: Mountain shenanigans and skiing turns all year. Seattle, USA/Patagonia Chilena (🇺🇸🇨🇱). http://vierstra.org
bioinformatics, cats, deep learning, genomics, Zeitlinger Lab ((all views are mine alone))
Epigenetics & Genomics
Harvard University & Broad Institute
https://www.macfound.org/fellows/class-of-2023/jason-d-buenrostro
buenrostrolab.com
Statistician, Computational Biologist, R |> Bioconductor
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Professor of Computational Biology, Imperial College London
MRC Investigator, Computational Regulatory Genomics, MRC Laboratory of Medical Sciences
Interested in eukaryotic promoters, enhancers and long-range developmental regulation
The Nordic EMBL Partnership is a major strategic player in Europe’s molecular understanding of disease mechanisms. It consists of four Nordic nodes: DANDRITE (DK), FIMM (FI), MIMS (SE) and NCMBM (NO).
Associate Professor at the university of Oslo
Genomics, AI, sequence-to-function models, mechanisms of the cis-regulatory code. Investigator at the Stowers Institute.
Assistant Professor 👩🏼💻 at Erasmus Medical Center Rotterdam researching genetics & gene regulation 🧬🖥 in the context of disease 🥼💉📊
Senter for digitalt liv Norge, DLN – et nasjonalt senter for bioteknologisk forskning og innovasjon – Centre for Digital Life Norway
Associate Professor at McGill University. Gene regulation, genomics, and bioinformatics. https://csg.lab.mcgill.ca/
data scientist (@ Fred Hutch) / rock climber / reader of books / person on a bike
https://www.monicagerber.com
Computational physicist. Working on self-organisation, AI & ALife • Postdoc at @real.itu.dk • SciComm at http://slam.science • 🎭🪩🏔️
🌐 https://najarro.science
Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
SciPy 2026 Conference for Scientific and Technical Computing topics in Python. Tutorials July 13-14, Conference July 15-17, Sprints July 18-19.
Studying genomics, machine learning, and fruit. My code is like our genomes -- most of it is junk.
Assistant Professor UMass Chan
Previously IMP Vienna, Stanford Genetics, UW CSE.
