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Olivia Smith

@oliviarxiv.bsky.social

Genomic Microdata Refinement @ UT Austin

49 Followers  |  196 Following  |  1 Posts  |  Joined: 25.10.2023  |  1.4987

Latest posts by oliviarxiv.bsky.social on Bluesky

These embryo-selection startups are clearly feeding into an alt-right ecosystem that revels in techno-futurism much as such movements have in the past. GWAS participants & parents navigating IVF deserve better than being used as tools to attract the attention of edge lords.

02.08.2025 02:19 β€” πŸ‘ 70    πŸ” 15    πŸ’¬ 1    πŸ“Œ 0

So when next we tell you that it's a terrible idea to fire your writers and editors and either a) hire some of them back as "assistants" to clean up LLM generated "AI" slop or b) just wholly rely on content mills which do the same, i want you to remember what's happening to the Chicago Sun-Times.

21.05.2025 14:17 β€” πŸ‘ 409    πŸ” 136    πŸ’¬ 4    πŸ“Œ 2

So exciting to see this out -- Michael has hugely accelerated my statistical training over the last few years and is incredible at explaining and teaching complex ideas in stats πŸ‘πŸ»πŸ‘πŸ»πŸ‘πŸ»

18.04.2025 14:52 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

1. LLM-generated code tries to run code from online software packages. Which is normal but
2. The packages don’t exist. Which would normally cause an error but
3. Nefarious people have made malware under the package names that LLMs make up most often. So
4. Now the LLM code points to malware.

12.04.2025 23:43 β€” πŸ‘ 7482    πŸ” 3412    πŸ’¬ 116    πŸ“Œ 430
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Opinion | Should Human Life Be Optimized? Advances in genetic testing and artificial intelligence are changing what’s possible for those undergoing I.V.F. Are we ready for the future of fertility?

The New York Times recently had an article on IVF and embryo selection which I think buries a few important ledes about these products ...

03.04.2025 17:29 β€” πŸ‘ 51    πŸ” 23    πŸ’¬ 2    πŸ“Œ 8

Wow. "NIH" canceled my co-mentored (with Dave Sulzer) PhD student's F31 funding. His work is on understanding the genetics and neuroscience of language learning disorders. F31 provides no indirect $ to Columbia, just pays his salary. Not that it should matter, but he's an American citizen. W.T.F.

11.03.2025 12:41 β€” πŸ‘ 529    πŸ” 223    πŸ’¬ 21    πŸ“Œ 17
Homepage - openRxiv openRxiv is an independent non-profit, the new organizational home for bioRxiv and medRxiv, enabling researchers to instantly share groundbreaking findings with the global scientific community.

Big news: we are setting up a new non-profit organization to run bioRxiv and medRxiv. It's called openRxiv [no it's not a new preprint server; it's dedicated organization to oversee the servers] openrxiv.org 1/n

11.03.2025 13:20 β€” πŸ‘ 2590    πŸ” 855    πŸ’¬ 55    πŸ“Œ 42

A quote from NYT "just the facts" news piece on eliminating Dept of Ed, describing conservative opposition in 1980:
"They argued that education should be primarily managed at the state and local levels rather than through federal mandates."
Imho accepts bad faith reasoning 1/

07.03.2025 12:41 β€” πŸ‘ 37    πŸ” 12    πŸ’¬ 2    πŸ“Œ 2
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A Direct Hit, by @holdenthorp.bsky.social @science.org
www.science.org/doi/full/10....
"This is a moment to unite."

11.02.2025 15:18 β€” πŸ‘ 905    πŸ” 378    πŸ’¬ 24    πŸ“Œ 18
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Texas bill that lets families use tax dollars for private schools swiftly sails through Senate Senate Bill 2 now heads to the House, where top officials say they have the support to create education savings accounts.

While Trump seeks to undermine public education, Gov. Abbott is defunding and destabilizing Texas public schools.

Abbott's voucher scheme will serve less than 2% of our 5.5 million Texas public school children. $1 billion in taxpayer dollars wasted on a plan that fast-tracks mediocrity.

11.02.2025 16:21 β€” πŸ‘ 55    πŸ” 19    πŸ’¬ 12    πŸ“Œ 3
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Elon Musk’s DOGE is feeding sensitive federal data into AI to target cuts Department of Government Efficiency workers embedded in the Education Department have been processing sensitive agency data using artificial intelligence.

Representatives from Elon Musk’s U.S. DOGE Service have fed sensitive data from across the Education Department into artificial intelligence software to probe the agency’s programs and spending, according to two people with knowledge of the DOGE team’s actions.

06.02.2025 17:22 β€” πŸ‘ 436    πŸ” 250    πŸ’¬ 111    πŸ“Œ 71
A Litmus Test for Confounding in Polygenic Scores Polygenic scores (PGSs) are being rapidly adopted for trait prediction in the clinic and beyond. PGSs are often thought of as capturing the direct genetic effect of one's genotype on their phenotype. ...

Think of a polygenic score you care about. Are direct genetic effects driving variation among people in this predictor? Or perhaps other, confounding factors? We at the @arbelharpak.bsky.social & @docedge.bsky.social Labs developed a method to tackle this question. [1/n]

04.02.2025 18:04 β€” πŸ‘ 78    πŸ” 38    πŸ’¬ 2    πŸ“Œ 1
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Censor CDC scientists and ask them to withdraw papers from medical journals?

This is not how it works, Mr President.

Our response @bmj.com on the Trump Executive Order and his "forbidden words"

www.bmj.com/content/388/...

04.02.2025 17:30 β€” πŸ‘ 1326    πŸ” 528    πŸ’¬ 69    πŸ“Œ 87

"grants are being reviewed independently by two staff members instructed to indicate any potential violations of Trump’s orders"
As the article says, these orders will likely be found illegal. Why is the NSF expediting this and why is anyone agreeing to reviewed already reviewed grants?

04.02.2025 14:06 β€” πŸ‘ 22    πŸ” 15    πŸ’¬ 0    πŸ“Œ 1
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Genomic Foundationless Models: Pretraining Does Not Promise Performance The success of Large Language Models has inspired the development of Genomic Foundation Models (GFMs) through similar pretraining techniques. However, the relationship between pretraining performance ...

The success of LLMs has inspired their extension to genomics data.

A preprints reports that such models lack understanding of genomics and provide minimal utility, even for basic tasks such as sequence classification.

www.biorxiv.org/content/10.1...

01.02.2025 23:41 β€” πŸ‘ 54    πŸ” 21    πŸ’¬ 4    πŸ“Œ 0
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BREAKING NEWS: CDC orders mass retraction and revision of submitted research across all science and medicine journals. Banned terms must be scrubbed. Any unpublished manuscript mentioning certain topics, including gender and "LGBT," must be pulled or revised.

CDC censors papers submitted to journals. "Researchers instructed to remove references to forbidden terms [including] transgender, LGBT, non-binary, assigned [fe]male at birth" insidemedicine.substack.com/p/breaking-n...

02.02.2025 12:57 β€” πŸ‘ 26    πŸ” 15    πŸ’¬ 3    πŸ“Œ 4

@oliviarxiv is following 18 prominent accounts