Group Leader - Genome Biology Unit
Are you ready to lead groundbreaking research in Genome Biology? Join us at EMBL! We are seeking a motivated scientist to lead an independent research group addressing exciting and original biological...
To all post-docs: The Genome Biology dept โช@embl.org
has an Independent faculty position. Fantastic place to set up your lab โgreat package: core funding, fantastic Ph.D. students, cutting edge core facilities & great colleagues. Closing date Sept 19th
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
30.07.2025 13:41 โ ๐ 165 ๐ 197 ๐ฌ 0 ๐ 7
Transitions in development โ an interview with Jeffrey Farrell
@jeffreyafarrell.bsky.social talks about becoming a group leader, his insights on advocacy for developmental biology and his belief in unifying single-cell biology with classical approaches.
journals.biologists.com/dev/article/...
28.07.2025 16:06 โ ๐ 58 ๐ 19 ๐ฌ 0 ๐ 1
Repressive cytosine methylation is a marker of viral gene transfer across divergent eukaryotes
Abstract. Cytosine DNA methylation patterns vary widely across eukaryotes, with its ancestral roles being understood to have included both transposable ele
Happy to see our latest work out in @molbioevol.bsky.social. We revisit the evolution of 5-methylcytosine across neglected eukaryotic supergroups, establishing an ancestral repressive role silencing genome invaders, both transposons and viral elements๐พ: academic.oup.com/mbe/advance-... ๐งต 1/7
28.07.2025 10:03 โ ๐ 92 ๐ 46 ๐ฌ 4 ๐ 0
Great opportunity! The Uni Vienna has launched a call (APART) for 4-funding for outstanding postdocs from a US institution. The host lab has to nominate by 1 August a candidate for further selection. Anyone interested in our work please contact me by email with CV/motivation letter. Hurry up!
26.07.2025 14:30 โ ๐ 24 ๐ 36 ๐ฌ 0 ๐ 0
๐จ๐จ๐จ
Please RT!
We're looking for a postdoc to join an exciting joint project between our lab @upf.edu & @crg.eu (Barcelona) and the Sander lab @mdc-berlin.bsky.social (Berlin) investigating how alternative splicing and microexons influences the maturation of pancreatic islets.
Deadline: 30/09/25๐
23.07.2025 14:27 โ ๐ 33 ๐ 44 ๐ฌ 1 ๐ 0
Very cool to see you will work on Oikopleura!
23.07.2025 16:49 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0
๐ข We are recruiting!
Several projects are available and can be tailored to the candidate's profile. Most include confocal imaging/spatial OMICs technologies.
Please share and RT ๐
23.07.2025 14:37 โ ๐ 28 ๐ 35 ๐ฌ 1 ๐ 1
Very excited to share the first preprint of the lab! We show that the nuclear pore protein TPR forms biomolecular condensates which keep heterochromatin away from the nuclear pore complexes and maintains global chromatin organization. Check it out, share it, tell us what you think!!
21.07.2025 17:52 โ ๐ 26 ๐ 7 ๐ฌ 2 ๐ 2
Evolution and origins of multicellularity across the tree of life
The study of the origins and evolution of multicellularity in different lineages has recently captured the attention of many research groups and is fueling the generation of numerous innovative reseaโฆ
Learn about the origins and #evolution of #multicellularity at EMBO Workshop "Evolution and origins of multicellularity across the tree of life" in Barcelona, Spain, 9โ11 October.
Registration deadline: 20 July
meetings.embo.org/event/25-mul...
#EMBOmulticellularity #EMBOevents ๐งช
16.07.2025 15:51 โ ๐ 6 ๐ 3 ๐ฌ 0 ๐ 0
We are looking for a student to continue our work on chromatin evolution:
www.nature.com/articles/s41...
www.biorxiv.org/content/10.1...
The project with @seanamontgomery.bsky.social will focus on chromatin state readers across eukaryotes.
More info: recruitment.crg.eu/content/jobs...
15.07.2025 11:30 โ ๐ 22 ๐ 31 ๐ฌ 0 ๐ 0
We are looking for new colleagues to come join us in Galway as group leaders (Junior and Senior). The Centre for Chromosome Biology is a great place and it is a good time to join. Please reach out if you want to chat about the opportunity!
www.nature.com/naturecareer...
16.07.2025 08:56 โ ๐ 64 ๐ 54 ๐ฌ 2 ๐ 0
Engineering yeast multicellular behaviors via synthetic adhesion and contact signaling
By designing synthetic toolkits for contact-based signaling (MARS) and cell-cell adhesion
(SATURN), we program yeast to form multicellular structures and perform complex tasks,
like building logic cir...
Online now @ Cell is the yeast multicellular engineering paper from Fankang Meng - the fruits of his productive PhD in our group. He developed modular synthetic biology tools to bring multicellular behaviours to yeast - specific adhesion, juxtacrine signalling and more. www.cell.com/cell/fulltex...
11.07.2025 15:01 โ ๐ 58 ๐ 24 ๐ฌ 3 ๐ 1
Celebrating 10 years of our lab with a new preprint:
www.biorxiv.org/content/10.1...
How does enhancer location within a TAD control transcriptional bursts from a cognate promoter?
Experiments by Jana Tรผnnermann and modelling by Gregory Roth
29.03.2025 12:45 โ ๐ 149 ๐ 58 ๐ฌ 6 ๐ 2
Decoding cnidarian cell type gene regulation
Animal cell types are defined by differential access to genomic information, a process orchestrated by the combinatorial activity of transcription factors that bind to cis -regulatory elements (CREs) to control gene expression. However, the regulatory logic and specific gene networks that define cell identities remain poorly resolved across the animal tree of life. As early-branching metazoans, cnidarians can offer insights into the early evolution of cell type-specific genome regulation. Here, we profiled chromatin accessibility in 60,000 cells from whole adults and gastrula-stage embryos of the sea anemone Nematostella vectensis. We identified 112,728 CREs and quantified their activity across cell types, revealing pervasive combinatorial enhancer usage and distinct promoter architectures. To decode the underlying regulatory grammar, we trained sequence-based models predicting CRE accessibility and used these models to infer ontogenetic relationships among cell types. By integrating sequence motifs, transcription factor expression, and CRE accessibility, we systematically reconstructed the gene regulatory networks that define cnidarian cell types. Our results reveal the regulatory complexity underlying cell differentiation in a morphologically simple animal and highlight conserved principles in animal gene regulation. This work provides a foundation for comparative regulatory genomics to understand the evolutionary emergence of animal cell type diversity. ### Competing Interest Statement The authors have declared no competing interest. European Research Council, https://ror.org/0472cxd90, ERC-StG 851647 Ministerio de Ciencia e Innovaciรณn, https://ror.org/05r0vyz12, PID2021-124757NB-I00, FPI Severo Ochoa PhD fellowship European Union, https://ror.org/019w4f821, Marie Skลodowska-Curie INTREPiD co-fund agreement 75442, Marie Skลodowska-Curie grant agreement 101031767
I am very happy to have posted my first bioRxiv preprint. A long time in the making - and still adding a few final touches to it - but we're excited to finally have it out there in the wild:
www.biorxiv.org/content/10.1...
Read below for a few highlights...
06.07.2025 18:14 โ ๐ 58 ๐ 24 ๐ฌ 1 ๐ 2
Decoding cnidarian cell type gene regulation https://www.biorxiv.org/content/10.1101/2025.07.01.662323v1
03.07.2025 13:33 โ ๐ 5 ๐ 3 ๐ฌ 0 ๐ 1
Our new paper on structure and growth of Porpita porpita - rdcu.be/etcY6 . Like Velella and Physalia, this is a colonial cnidarian that floats at the surface of the Ocean. The whole colony arises form a single embryo through clonal growth that gives rise to many specialized bodies.
24.06.2025 13:19 โ ๐ 49 ๐ 13 ๐ฌ 0 ๐ 0
Excited to share our new work on the 3D architecture of the ctenophore aboral organ!
We explored its remarkable cellular diversity and integration with the syncytial nerve net, uncovering connectivity and insights into the evolution of sensory complexes.
www.biorxiv.org/content/10.1...
28.06.2025 13:03 โ ๐ 44 ๐ 17 ๐ฌ 0 ๐ 0
Canโt recommend this enough! @msarscentre.bsky.social is a great place to do science and Bergen is also well worth a visit!
28.06.2025 08:35 โ ๐ 7 ๐ 1 ๐ฌ 0 ๐ 0
new preprint alert from the lab: bringing some order into the wide and wild diversity of archaeal histones. Who has acidic histones? who has multiple histones? what histone combinations do archaea employ and why? find all of this and more here
www.biorxiv.org/content/10.1...
27.06.2025 16:01 โ ๐ 68 ๐ 22 ๐ฌ 1 ๐ 1
Congratulations @annaferraioli.bsky.social and all the authors, really cool work!
28.06.2025 08:32 โ ๐ 3 ๐ 0 ๐ฌ 1 ๐ 0
Our new paper is out: "The 3D architecture of the ctenophore aboral organ & the evolution of complex integrative centers in animals.
We reveal a remarkable cell type diversity, nerve net condensation, a multilayered circuit & gene expression profiles.
www.biorxiv.org/content/10.1... #ctenophores
28.06.2025 06:55 โ ๐ 75 ๐ 29 ๐ฌ 4 ๐ 5
Congratulations to five researchers at University of Galway who have been awarded more than โฌ3.2m funding from @researchireland.ie Pathway programme in a special investment in projects aligned with national priorities. ๐๐
25.06.2025 14:50 โ ๐ 5 ๐ 2 ๐ฌ 1 ๐ 0
Postdoctoral Fellowships
The information provided on this page is a summary of the main rules and requirements for Postdoctoral Fellowships (PFs) and who can apply for them.
๐จWe are looking for post-doctoral candidates to apply for a MSCA fellowship.
Projects on gene regulation in neural development or neurdegenerative diseases using single-cell omics.
Computational & wet-lab candidates are welcomed! #postdoc #MSCA #Barcelona #singlecell.
25.06.2025 08:23 โ ๐ 8 ๐ 7 ๐ฌ 1 ๐ 0
The Frank lab here in Galway are looking for a new PostDoc to join them...I cant recommend this enough so, if you are looking for a position, contact Uri!
24.06.2025 16:00 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0
playful scientist
cynical biologist
nerdy nerd & teacher
professor de La Mancha
admiring humanity, curiosity & Yossarian
Lord of Sealand
husband & father
citizen of Prague & peasant of Bohemia
Synthetic Biology & Synthetic Genomics @ Imperial College London and the Sanger Institute. Bilingual in English and DNA. Views are either my own or my microbes'
Same content, different website! Human evolutionary genomics, functional genomics and archaic hominins. Group leader in Human Genomics at SVI in Melbourne/Naarm, Australia. Sometimes I go to Estonia.
Asst Prof at University of California, Irvine.
Genetics, Genomics, Gene Regulation, Development. Views are my own.
https://www.kvonlab.org/
Enhancers, 3D genome organisation, pluripotent stem cells
Babraham Institute and Enhanc3D Genomics
Probabilistic machine learning to address questions in evolution and health #EvolutionaryMedicine. PI at the Centre for Genomic Regulation, co-leading a group with Mafalda Dias. Previously Harvard.
Regeneration | DevBio | Organoids
Postdoc | EMBO and MSCA Fellow @karolinskainst
Driven by curiosity
PhD @TSS_Lab @UniofOxford
For inclusion&equity in STEM!
Snr. Ed. at Nature, author of 'The Decline & Fall of the Human Empire' & 'A (Very) Short History of Life on Earth'. Pronouns he/him/his. Adjectives dopey/sleepy/grumpy. Reposts don't imply approval. Views own. Black belt in Tsundoku. More of a dog person.
Virginie Hamel & Paul Guichard Lab at University of Geneva
#cryoEM/ETโ๏ธ and #UExM โ๏ธ #ExpansionMicroscopy #TeamTomo
Genรจve, Suisse ๐จ๐ญ
https://mocel.unige.ch/research-groups/guichard-hamel/overv
EPIGENETIC HULK SMASH PUNY GENOME. MAKE GENOME GO. LOCATION: NOT CENTROMERE, THAT FOR SURE
Biologist studying evolution, development, and gene-regulation. Group leader at EMBL, Heidelberg. Climber.
Group leader @EMBL Heidelberg | Archaea | Chromatin | Cryo-EM and cryo-ET | Evolution | Structure
Developmental Biologist @UCL
https://www.ivanovitch-lab.com
Departmental Group Leader - Protein Bioinformatics @ Max Planck Institute for Biology - Tรผbingen @mpi-bio-fml.bsky.social
Protein evolution // MPI Bioinformatics Toolkit // prokaryotic cell-surface proteins // prokaryotic histones
De novo evolved proteins. @bornberglab.bsky.social. he/him.
bornberglab.org/people/eicholt/
SNSF Ambizione Fellow | Junior PI in Plant Pathology @ ETH Zรผrich | Specializing in fungal genome architecture & TE-driven evolution
Postdoctoral researcher in the Sebe-Pedros and Marti-Renom Labs at CRG. Transposable elements enthusiast, passionate about piRNAs, 3D genomes, and Star Trek ๐
Prof at U. of Bergen. Franรงaise and Norsk. Molecular modelling and protein bioinformatics. Membrane proteins are my favorites. Mother of two girls.
Updates from the Molecular Genetics of Protochordates team at
@msarscentre.bsky.social - University of Bergen.