Hunter Shain's Avatar

Hunter Shain

@shainlab.bsky.social

UCSF, Department of Dermatology. Part of HTAN. Cancer, genomics, melanoma, cutaneous squamous cell carcinoma, dermatology, somatic mutations, tumor evolution, spatial transcriptomics, single-cell

486 Followers  |  312 Following  |  198 Posts  |  Joined: 14.11.2024  |  1.8218

Latest posts by shainlab.bsky.social on Bluesky

Grants should have page limits on letters of support. If you need more than 3 pages (1 page per letter x 3 letters), then maybe you should not be leading the grant.

31.01.2026 02:58 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Immune evasion through mitochondrial transfer in the tumour microenvironment - Nature Mitochondria with mutations in their DNA from cancer cells can be transferred to Tโ€‰cells in the tumour microenvironment, which leads to Tโ€‰cell dysfunction and impaired antitumour immunity.

I am just reading this paper, and it is absolutely wild. Tumor cells acquire mutations in mitochondria, and then transfer them to T-cells, and the mutant mitochondria drives dysfunction in the T-cells?! www.nature.com/articles/s41...

28.01.2026 01:52 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Spatial omics at the forefront: emerging technologies, analytical innovations, and clinical applications Liu et al. review how spatial omics technologies reveal the organization, interaction, and evolution of tumor cells and their microenvironment within tissues. They highlight analytical advances that t...

Recent review from HTAN. Linghua Wang with a timely review on spatial omic technologies Cancer Cell. www.cell.com/cancer-cell/...

26.01.2026 17:31 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Cellular neighborhoods in cancer - Nature Cancer Tan and colleagues discuss recent advances in spatial omics and computational models that inform the classification and clinical relevance of cellular neighborhoods in cancer.

A new perspective is out by Kai Tan and Lichun Ma from the Human Tumor Atlas Network discussing the emerging concept of the cellular neighborhood. www.nature.com/articles/s43...

26.01.2026 17:26 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Keaton Wagler with the best college basketball game of the year and ESPN doesnโ€™t even have a picture.

25.01.2026 05:21 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

A new preprint from the lab, with postdoc @deboraycb.bsky.social and collaborators @aidaandres.bsky.social and Tim Connallon:

โ€œCharacterising the detectable and invisible fractions of genomic loci under balancing selectionโ€
www.biorxiv.org/content/10.6...

21.01.2026 15:32 โ€” ๐Ÿ‘ 25    ๐Ÿ” 18    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

Thinking about the soft money problem in science. My institution will send 100 emails to faculty list serves guilt tripping someone to volunteer to teach before offering a dime of compensation.

14.01.2026 17:07 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

My take so far is that Universities need more skin in the game to reduce churn. Fewer soft positions. Thoughtful reductions in indirect reimbursement (not an overnight slash to 15%). Give them an incentive to support scientists long-term instead of treating scientists like a source of govt. revenue

14.01.2026 16:21 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

As much as I agree that administrative bloat is an issue, my hot take is that reducing administrative bloat to apply for a grant = more churn introduced into the system. AI is already helping to offset administrative burden and increasing apps/person. Larger systematic changes are needed

14.01.2026 15:59 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

He acknowledges administrative bloat, and when asked the top issue, he says regulations around human subjects research. I could not agree more. This has stymied so much of my work

14.01.2026 15:47 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Whatโ€™s Wrong with NIH Grants? โ€œScience is fundamentally different than remodeling a kitchenโ€

Reading the Mike Lauer interview. A very informative take from an insider on the state of NIH. www.statecraft.pub/p/whats-wron...

14.01.2026 15:47 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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patrick star from spongebob squarepants with his hands folded ALT: patrick star from spongebob squarepants with his hands folded

Likewise, Congressman Cole from Oklahoma is the chair of the overall House Appropriations committee.

If you can, reach out to his office as well.

It is noteworthy that OMB is willing to veto a bill over a minor-seeming NIH operational issue.

This makes me think this is part of a bigger plan...

14.01.2026 13:33 โ€” ๐Ÿ‘ 46    ๐Ÿ” 25    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

The Luka Doncic for Anthony Davis trade looked bad from the get-go for the Mavericks, and it is aging even worse.

13.01.2026 19:57 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I think I have reached the point in my career where I have reviewed more grants than I have had grants reviewed.

13.01.2026 19:14 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I get the sense that most reviewers read in alphabetical order. I try to randomize my pile to help break up the patterns a bit.

12.01.2026 17:15 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Or as another e.g. when you read a spectacular grant (in either direction), this might influence your take on the next grant (is it possible that the 2 best grants in the pile could be in a row or do you give that second grant a worse score?!)

12.01.2026 17:15 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

This is probably overkill, but when reviewing grants, I randomize the order in which I read them. I worry that order matters. E.g. for the first grant, you do not have an overall sense of the quality and possibly err on the side of an average score.

12.01.2026 17:15 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

We (U.S. citizens) literally pay the tariffs. I bought something from Etsy from an international seller. UPS guy came to my door holding the package and gave me two options. 1. Write a check to UPS for the tariff or 2. refuse delivery and send it back.

09.01.2026 22:35 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
ucsf tanning bed

ucsf tanning bed

Great to see research on tanning bed and cancer risk from @bishaltandukar.bsky.social @shainlab.bsky.social on todayโ€™s @ucsanfrancisco.bsky.social Town Hall www.ucsf.edu/news/2025/12... #UCSFCancerProud

08.01.2026 20:42 โ€” ๐Ÿ‘ 6    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

You should add @timkawakami.bsky.social to this list

03.01.2026 00:05 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I know for me sports talk was the only thing I missed about Twitter until I found this list.

If you're missing having NFL memes and analysis in your feed in-between the politics and whatever reason you made a Bluesky account in the first place, Mina has an A+ list of peeps to follow.

02.01.2026 21:31 โ€” ๐Ÿ‘ 152    ๐Ÿ” 15    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 0

Also thank you to funders at the National Cancer Institute, NIAMS, DOD, and @melanomaresearch.bsky.social

13.12.2025 18:45 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Thank you to @bishaltandukar.bsky.social and Pedram Gerami (co-first authors) and the many others who contributed. @delahnydeivendran.bsky.social @sharmaharsh.bsky.social among many others not on Blue Sky

13.12.2025 18:45 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Itโ€™s been encouraging to see this work resonate beyond the scientific community.

๐Ÿ“ฐ The Daily Telegraph covered our findings and their public-health implications here:
www.telegraph.co.uk/news/2025/12...

#PublicHealth #ScienceCommunication

13.12.2025 18:45 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Molecular effects of indoor tanning The skin cells of tanning bed users have distinct mutational features as compared to people who only experience natural sunlight.

Proud to share our new paper in Science Advances.

We show that indoor tanning beds cause widespread mutational damage across the skin to increase melanoma risk, especially in body sites that rarely see sunlight.

www.science.org/doi/10.1126/...

#Melanoma #SkinCancer

13.12.2025 18:45 โ€” ๐Ÿ‘ 10    ๐Ÿ” 3    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Hitting 1800 elo in style with a smothered mate!

05.12.2025 21:42 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

More details in our new work:
๐Ÿ”— www.nature.com/articles/s41...

02.12.2025 00:29 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Persistence = more time to accumulate mutations.
Higher mutation rates = higher odds of eventually hitting a growth-promoting driver mutation.
Thatโ€™s how these early lesions quietly set the stage for full tumor evolution.

02.12.2025 00:29 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

My hypothesis: these early mutations blunt the cellโ€™s ability to undergo apoptosis or repair UV-induced DNA damage.
In a UV-rich environment, such impaired cells simply persist longer.

02.12.2025 00:29 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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So what are these early mutations doing?
They appear to create a mutator phenotype.
Keratinocytes with TP53 or NOTCH-pathway mutations carry ~10ร— more mutations than nearby cells without them.

02.12.2025 00:29 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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