I think 5kb, 10kb, 25kb, 50kb and 100kb personally.
01.08.2025 20:03 โ ๐ 1 ๐ 0 ๐ฌ 0 ๐ 0
Here's the White House's proposed reorganization of NIH institutes & budgets. Details in: www.hhs.gov/sites/defaul...
30.05.2025 23:55 โ ๐ 4 ๐ 3 ๐ฌ 0 ๐ 0
myloasm - metagenomic assembly with (noisy) long reads
Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).
myloasm-docs.github.io
28.05.2025 17:53 โ ๐ 131 ๐ 77 ๐ฌ 5 ๐ 3
Complete sequencing of ape genomes - Nature
Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evol...
Telomere-to-telomere genome sequences of six ape species: chimpanzee, bonobo, gorilla, Bornean & Sumatran orangutan, & siamang! Invaluable resource for future evolutionary studies of humans & our closest living relatives. Kateryna Makova, @aphillippy.bsky.social, Evan Eichler & co in @nature.com.๐๐งฌ๐งช
09.04.2025 22:06 โ ๐ 55 ๐ 23 ๐ฌ 0 ๐ 0
Long reads such as @nanoporetech.com or @pacbio.bsky.social can provide insights into epigenetic. We
@yileifu.bsky.social & @timp0.bsky.social )summarize the latest #Bioinformatics approaches & why this matters! Out now @natrevgenet.bsky.social at:
bit.ly/4cjxUtl
@bcmhouston.bsky.social @jhu.edu
03.04.2025 16:00 โ ๐ 42 ๐ 16 ๐ฌ 0 ๐ 1
We summarized state-of-the-art computational methods for DNA methylation analysis using long-read sequencing, covering everything from base calling to sample-level, cell-type-level, and even population-scale analysis. Huge thanks to @sedlazeck.bsky.social and @timp0.bsky.social for this great work!
29.03.2025 00:07 โ ๐ 17 ๐ 10 ๐ฌ 0 ๐ 2
The Earth BioGenome Project (EBP), a moonshot for biology, aims to sequence, catalog, and characterize the genomes of all of Earth's eukaryotic biodiversity over a period of ten years.
๐ฒKeep up with all EBP updates: https://linktr.ee/earthbiogenomeproject
CS PhD student @UW working on ML for nanopore protein sequencing
Director Malaria Research Institute @JohnsHopkins, Bloomberg Distinguished Professor, 'omics of parasites and vectors. Posts are my own.
Postdoc in the Transcriptomics and Functional Genomics Lab at the Barcelona Supercomputing Center studying the impact of human variation on the transcriptome. California -> Catalunya
Infectious disease epidemiologist @JohnsHopkinsSPH. Associate professor. Author of CRISIS AVERTED (Viking). Outbreak newsletter at caitlinrivers.substack.com
Physicist Turned Psychologist | Senior Researcher in #STEMed | Meta-Analysis Nerd | https://d-miller.github.io/
Also posts about ๐งช science funding to focus my attention.
Personal account. I donโt speak for my employer or any other orgs.
Asst Prof at UT Health San Antonio, Alzheimer's researcher, microglia evangelist, feminist, climber, ceramicist, & cat lady. all opinions my own.
Husband, Father and grandfather, Datahound, Dog lover, Fan of Celtic music, Former NIGMS director, Former EiC of Science magazine, Stand Up for Science advisor, Pittsburgh, PA
NIH Dashboard: https://jeremymberg.github.io/jeremyberg.github.io/index.html
Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
#RStats @Bioconductor.bsky.social/๐ง genomics @lieberinstitute.bsky.social + Asst. Prof. @jhubiostat.bsky.social/@lcgunam @jtleek.bsky.social @aejaffe.bsky.social alumni/ @libdrstats.bsky.social @CDSBMexico.bsky.social
http://lcolladotor.github.io
Genetics professor at Harvard Medical School. Interested in RNA life cycles and genome organization across the cell, from the nucleus to mitochondria.
I study neural development and cell fate commitment in cephalopods (and sometimes mammals) @ Johns Hopkins. Nice even split between computational and molecular biology.
UW biology prof.
I study how information flows in biology, science, and society.
Book: *Calling Bullshit*, http://tinyurl.com/fdcuvd7b
LLM course: https://thebullshitmachines.com
Corvids: https://tinyurl.com/mr2n5ymk
I don't like fascists.
he/him
Studying gene regulation and transcription factor binding with machine learning. Assoc Prof at Penn State. ๐ฎ๐ช
Resident panhandler, http://trichelab.org/
Posts may contain trace quantities of blood๐ฉธ, chromatin ๐งฌ, and stats ๐งฎ
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Genomics, big data, open science, diversity. Director of the Centre for Population Genomics, focused on building a more equitable future for genomic medicine. Opinions my own.