Hide Doi Lab.

Our new publication on HOBIT, a software tool for polyploid gene expression analysis. Compared with our previous method HomeoRoq (2014), HOBIT enables direct and higher-quality analysis of complex allohexaploid species such as bread wheat.

Scientific productivity gap based on English-language peer-reviewed papers. Shown are the maximum % differences in the number of peer-reviewed papers published by female native English speakers from a high-income country (-45%), female non-native English speakers from a high-income country (-60%), and female non-native English speakers from a lower-middle income country (-70%), compared to male native English speakers from a high-income country (red flag).

Women, non-native English speakers & those form low-income countries are disadvantaged in science but by how much? We found that women with non-English first languages from low-income countries publish up to 70% fewer in English than their counterparts. 1/5
doi.org/10.1371/jour...
#languagebarriers

Thank you for your visiting to Kyoto and your great talk!

We have a special seminar (Hybrid) on 23 May (Fri.) 13:15-14:15 (JST)

Prof. Dr. Matthias C. Rillig　(Freie Universitaet Berlin, Germany）
"Effects of multiple concurrent global change drivers on soils and ecosystems"

You can get the Zoom link:
kyoto-u-edu.zoom.us/meeting/regi...

というわけで論文出ました。サイエンス誌のトップページをトクノシマカンアオイとその送粉者の写真が飾っています。ちょっと自分でも信じられないです。
www.science.org

Sexual conflict in resident species can facilitate establishment of a maladapted invader | The American Naturalist: Vol 0, No ja

A paper with Miguel Gómez-Llano and @adamsiepielski.bsky.social entitled "Sexual conflict in resident species can facilitate establishment of a maladapted invader" was published in Am. Nat. @asn-amnat.bsky.social! doi.org/10.1086/736568

Accelerating ecosystem monitoring through computer vision with deep metric learning Significant progress has been made in the application of deep learning models to ecosystem monitoring. Deep learning has opened up new opportunities i…

We published a review paper on the application of deep metric learning, a new deep learning method, to ecosystem monitoring.

www.sciencedirect.com/science/arti...

Rで学ぶ個体群生態学と統計モデリング - 共立出版 岡村 寛 著

おお、岡村さんが本を出版されている。 www.kyoritsu-pub.co.jp/book/b101311... Template Model Builderも扱われているらしい。MCMCではなく最尤法なのに複雑なモデルが謎に収束する例のアレ。点推定したいときや検定したいときに便利。

This is figure 1, which shows observations of subsurface microplastics in the ocean.

The distribution and behaviour of microplastics in the ocean is influenced by their size, with some microplastics potentially entering carbon cycles, according to a study in Nature. go.nature.com/3ScX6Zd 🌊 🧪

Our study ‘The #global #human impact on #biodiversity’ is out in @nature.com: www.nature.com/articles/s41...

🌍🌐🐟🌿🪲

Unprecedented synthesis of >2000 studies led by @francoiskeck.bsky.social shows humans are not only shrinking species numbers—but reshaping entire communities across the planet.
🧵1/5

We offer a 5-year research position in the #PlanktonEcology lab in Wilhelmshaven. Are you interested in empirically testing ecological concepts? We offer a stimulating scientific environment, experimental facilities & support to establish an independent research profile
uol.de/en/job/postd...

@icbm-uol.bsky.social offers a fully funded professorship in theoretical oceanography. Join a great team of physicists, chemists, and biologists working on the marine environment. Oldenburg is a truly livable city and connected to a range of marine institutes in NW Germany

uol.de/en/job/w2-pr...

StoichLife: A Global Dataset of Plant and Animal Elemental Content - Scientific Data Scientific Data - StoichLife: A Global Dataset of Plant and Animal Elemental Content

I’m thrilled to finally share our new dataset paper-years in the making! This has been an incredible rewarding project, and it was a true pleasure to work with such an amazing team of researchers. Huge thanks to supported by @idiv for the support www.nature.com/articles/s41...

We were honored to celebrate with our Awardees at the ceremony. Congratulations to all!👏

From left to right: Hiroshi Tomimatsu (EiC of Ecological Research @hrstm.bsky.social ), Kohmei Kadowaki, Naoyuki Nakahama @naoyukinkhm.bsky.social, Samuel R. P.-J. Ross

#ESJ72 #ERPaperAward

Bringing traits back into the equation: A roadmap to understand species redistribution In this opinion piece, we explore under which circumstances species traits are expected to explain the rates and directions of species redistributions in response to climate change and discuss how fu...

Nice to see our opinion paper on #species #range #shifts & #species #traits among the 🔟 most downloaded papers in 2024 in #GCB 🌏🌐🧪

@globalchangebio.bsky.social

shorturl.at/j7tQW

Postdoctoral position in biology Halmstad University Work at a University where different perspectives meet! Halmstad University adds value, drives innovation and prepares people and society for the future. Since the beginning in 198

We are announcing a postdoc position in population genetics at Halmstad Uni, Sweden

Project is to investigate population structure of salmonoid fish at different scales, using a variety of methods. One goal is to evaluate eDNA a a tool for population genetics.

hh.varbi.com/en/what:job/...

Thank you for share this! could you please add me?

Hydropower impacts on riverine biodiversity - Nature Reviews Earth & Environment Hydropower is a renewable energy source that can contribute to growing energy demands. This Review considers the ecological consequences of hydropower plants on riverine systems and emphasizes the urg...

Hydropower impacts on riverine biodiversity. A paper recently out in Nature Reviews - Earth and Environment with @fengzhihe.bsky.social @scjaehnig.bsky.social jcsvenning.bsky.social and others! A good one-stop shop for understanding the impacts of hydropower dams. www.nature.com/articles/s43...

I started an #eDNA starter pack as one didn’t exist yet. Feel free to message me to get your name added. Open to all! go.bsky.app/U2vgV5Q

Updated Limnology! starter pack here: go.bsky.app/Qv3DLZ6

Let‘s try a #metabarcoding starter pack to nucleate people interested. Welcome molecular #biodiversity monitoring people. Let’s try to keep us posted on updates regarding papers, projects, methods. Happy weekend.☀️#eDNA

go.bsky.app/Qvqgknp

Here's a Limnology starter pack! I am sure I left great people out so tag me so I can add them. go.bsky.app/Qv3DLZ6

We published a new paper in PNAS to define the Anthropocene onset using anthropogenic fingerprints in global geological archives. We found that the number of anthropogenic fingerprints began to increase abruptly from 1952 ± 3 CE.
www.pnas.org/doi/10.1073/...

Hideuki Doi, myself and Izumi Katano in front of Himeji Castle

Very fun reunion with former lab members Hideyuki Doi @doi-lab.bsky.social and Izumi Katano. Thanks for the opportunity to talk about some ecological stability work, the great hospitality, and showing me around. Himeji Castle is truly amazing #PlanktonEcologyLab