Homère J. Alves Monteiro's Avatar

Homère J. Alves Monteiro

@homerej.bsky.social

Postdoc at the California Academy of Science Genome skimming - Oyster genomics - museomics

861 Followers  |  495 Following  |  14 Posts  |  Joined: 19.10.2023  |  2.0745

Latest posts by homerej.bsky.social on Bluesky

Sujet de stage M2 sur la "dock mussel", cet écotype de moules hybrides qui habite dans les ports. L'objectif est de tester si la dock mussel s’est adaptée grâce à sa variance génétique d’admixture ou si l’admixture n’est que le corolaire du contact secondaire entre les deux espèces parentales.

17.09.2025 06:49 — 👍 3    🔁 10    💬 1    📌 1
A photo of Viola Ford Fletcher with her hands clasped

A photo of Viola Ford Fletcher with her hands clasped

Today is the 111th birthday of Viola Ford Fletcher, the oldest living survivor of the 1921 Tulsa race massacre

10.05.2025 15:20 — 👍 27515    🔁 6307    💬 555    📌 324
Graphic saying "marine biology career advice: ask us anything"

Graphic saying "marine biology career advice: ask us anything"

I keep seeing the same questions asked in marine biology career advice groups. So along with some colleagues, I'm trying to compile a bunch of common questions and answer them all at once. Please share widely with anyone who might have questions!

Submit ?s here: forms.gle/LEd4egJgvfGf...
🦑🧪🌎🐟

03.04.2025 14:00 — 👍 104    🔁 48    💬 0    📌 2

FYI - Harvard law graduates alone comprise 8% of the federal judiciary

This will have massive downstream consequences on descriptive representation in the courts in 15-20 yrs

17.12.2024 14:26 — 👍 1054    🔁 295    💬 35    📌 13
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I will never, ever get over this.

03.12.2024 17:49 — 👍 41487    🔁 5380    💬 1348    📌 519
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How indigenous scientists are taking control of their data Next-generation sequencing is helping Native nations with sovereignty and genetic research

In an effort to attract followers We share this article and #IndigenousSTEAM #IndigenousSTEM #NativeAmerican #AmericanIndian #LatinAmerica #Hawaii #Polynesia #Pasifika #Maori #Australia #Indigenous #FirstNations #IPLCs www.illumina.com/company/news...

02.12.2024 05:19 — 👍 34    🔁 12    💬 0    📌 2
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🦪 Out yesterday some genome-wide work on the native European flat oyster , <i>Ostrea edulis</i>. Once widespread along European coasts but is now functionally extinct due to overfishing and disease. Threads 1/n 🦪
🔗 onlinelibrary.wiley.com/doi/full/10....

13.11.2024 12:37 — 👍 11    🔁 4    💬 2    📌 1

Yea, can’t find an already one week published paper 🫡

22.11.2024 18:39 — 👍 0    🔁 0    💬 0    📌 0

Hello Michael, can I join this one?

22.11.2024 11:25 — 👍 1    🔁 0    💬 0    📌 0

Hey Chris, can I join too? Hope you’re good!

14.11.2024 12:17 — 👍 0    🔁 0    💬 1    📌 0

My very first publication here and for a great reason 🎉
It was lovely to interact with @homerej.bsky.social during my time at the Technical University of Denmark. It is even better to see his article now out 🦪 🧬 📄

13.11.2024 20:56 — 👍 5    🔁 2    💬 0    📌 0
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I have a fully funded PhD position in my lab on developmental genetics/evolution of gut development in lampreys + in vitro culture development. Get in touch if keen (see flyer 👇) and please share widely. Open to all nationalities. Funded through NorthWestBio DTP: www.gla.ac.uk/postgraduate...

13.11.2024 14:08 — 👍 20    🔁 22    💬 0    📌 4
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Genome‐Wide Population Structure in a Marine Keystone Species, the European Flat Oyster (Ostrea edulis) Ostrea edulis, the European flat oyster, was once a widespread economically and ecologically important marine species, but has suffered dramatic declines over the past two centuries. Consequently, th...

Partners are not yet(?) on Bsky.
Thanks to all of them for providing oysters: onlinelibrary.wiley.com/doi/full/10....

13.11.2024 12:59 — 👍 2    🔁 0    💬 0    📌 0

likewise! Actel is getting massive! Congrats!

13.11.2024 12:56 — 👍 1    🔁 0    💬 0    📌 0
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🦪Almost forgot.Interested in your local pop of oyster level of inbreeding? All good if you ain't dutch ;)
🦪

13.11.2024 12:55 — 👍 2    🔁 0    💬 1    📌 0
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These large chromosomal inversions house variants potentially shielded from local extirpation following translocations. They provide another layer of information for conservation management of the species.
That plus more in the full article: onlinelibrary.wiley.com/doi/full/10....
5/n

13.11.2024 12:51 — 👍 2    🔁 0    💬 1    📌 0

The populations still show an isolation by distance pattern with 6-7 main clusters, plus some extremely divergent populations in Norway—most likely due to no gene flow and genetic drift. 4/n

13.11.2024 12:49 — 👍 3    🔁 0    💬 1    📌 0
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We sampled all over the natural range of the species (thanks to many partners). We found a lack of a signal from oyster translocation efforts and some segregating inversions that may be associated with adaptation. 3/n

13.11.2024 12:49 — 👍 2    🔁 0    💬 1    📌 0

We looked into the impact of translocations on the few wild populations left. Translocations were numerous and extensive throughout European countries. Even the Romans were moving oyster spat from productive areas in the Adriatic to oyster farms in sheltered lagoons along the Italian coast! 2/n

13.11.2024 12:45 — 👍 2    🔁 0    💬 1    📌 0
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🦪 Out yesterday some genome-wide work on the native European flat oyster , <i>Ostrea edulis</i>. Once widespread along European coasts but is now functionally extinct due to overfishing and disease. Threads 1/n 🦪
🔗 onlinelibrary.wiley.com/doi/full/10....

13.11.2024 12:37 — 👍 11    🔁 4    💬 2    📌 1

Thanks a lot!

11.11.2024 16:52 — 👍 1    🔁 0    💬 0    📌 0

Hej Jacob, can I join that low Ne Wolfpack?hehe

11.11.2024 16:48 — 👍 1    🔁 0    💬 1    📌 0

Would love to be added too David🫡🫡

11.11.2024 16:46 — 👍 1    🔁 0    💬 1    📌 0

HEY YOU PUT SOME BLACK PEOPLE IN YOUR STARTER PACK

08.11.2024 03:42 — 👍 956    🔁 141    💬 27    📌 10
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GitHub - pdimens/harpy: Process raw haplotagging data, from raw sequences to phased haplotypes, batteries included. Process raw haplotagging data, from raw sequences to phased haplotypes, batteries included. - pdimens/harpy

Harpy v1.0 is officially out and... YOU DON'T NEED DATA. You read that right, you don't need data to get started. It now includes a genomic variant and linked-read simulator, so all you need is a haploid genome and you can simulate the rest to try out haplotag analysis 😁
github.com/pdimens/HARPY

05.06.2024 18:43 — 👍 3    🔁 3    💬 0    📌 0

Darwin’s Origin was frequently (if unfairly) criticized as being a theory of the origin of species with the origin of species left out. I don’t know who said it first, but I’d guess it wasn’t long after its 1859 publication. I wonder if Dana was (consciously or not) calling back.

🐋🌱 #histstm

03.02.2024 17:18 — 👍 6    🔁 1    💬 0    📌 1
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Higher mortality is not a universal cost of dispersal: doi.org/10.1086/726220

Our 32-year study of African wild dogs shows that dispersing individuals actually face lower mortality compared to residents. Time to rethink some of the long-held assumptions on cost of dispersal.

@asn-amnat.bsky.social

30.10.2023 12:53 — 👍 18    🔁 4    💬 0    📌 0

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