So happy to see my first first-author paper published! π
A short thread on how Ectocarpus and its TE secrets have kept me busy lately:
rdcu.be/eITQH
@petrollromy.bsky.social
PhD student @mpi-bio-fml.bsky.social | Interested in algae, plants, evolution and genomics.
So happy to see my first first-author paper published! π
A short thread on how Ectocarpus and its TE secrets have kept me busy lately:
rdcu.be/eITQH
Excited to share our new preprint on giant virus infection in brown algae: Latent endogenous viral elements drive active infection and inheritance in a multicellular host
doi.org/10.1101/2025...
Super glad to contribute to this study on chromatin evolution in brown algae! Special thanks to Jeromine Vigneau, @borglab.bsky.social and Susana Coelho for making this happen.
www.biorxiv.org/content/10.1...
Genomes of brown algae with different sex determination systems show that U/V sex chromosomes evolved 450β224βmillion years ago and show remarkable conservation of genes within the sex-determining region, despite independent expansions of the sex locus in each lineage
www.nature.com/articles/s41...
Transposable elements in brown algae? π
Yes, theyβre full of surprises β¨
Come meet Ectocarpus at #ESEB2025!
πRoom 113 - S28.03
ποΈ Thursday, 2:30pm
So excited to be at #ESEB2025 presenting poster 221 today!βοΈ
Check out our chromosome-level genome of Bostrychia, a red alga from the complex Ceramiales order, revealing massive genome expansion by giant Plavaka DNA transposons, the evolution of expanded gene families and UV sex chromosomes!
A wonderful summary of our recent work in @currentbiology.bsky.social . Itβs an honour for it to have been written by such respected researchers in the field. Thank you @multicellgenome.bsky.social & team! π€©
25.06.2025 07:39 β π 7 π 2 π¬ 1 π 0Delighted to see our work now published in @currentbiology.bsky.social. A great place for Bostrychia to stake its claim as an emerging red algal model system. Check it out here: www.cell.com/current-biol...
10.05.2025 12:13 β π 116 π 42 π¬ 4 π 0New study with @petrollromy.bsky.social @borglab.bsky.social traces the evolution of epigenetic silencing in plants. Deep conservation of PRC2-mediated H3K27me3 marks across green algae suggest ancient, conserved networks of gene repression.
π doi.org/10.1093/molb...
#evobio #molevol #plants
I am very excited to see my first PhD paper out as a preprint. "The expanded Bostrychia moritziana genome unveils evolution in the most diverse and complex order of red algae". Huge thanks to @borglab.bsky.social for the great supervision and guidance through this exciting project!π
12.02.2025 10:09 β π 17 π 5 π¬ 1 π 0Diagram of somatic TE insertions across the A. thaliana genome
In our latest @biorxiv-genomic.bsky.social preprint, we describe our approach to use PacBio HiFi reads to detect somatic TE transposition -- good enough to detect rare events that are present in only single cells. Led by Andrea Movilli.
#plantscience
www.biorxiv.org/content/10.1...
TAPscan v4, final verson available:
dx.doi.org/10.1111/tpj....
Annotate TF families yourself or access web-UI online. Thanks to @petrollromy.bsky.social @shiltemann.bsky.social @jandevries.bsky.social @watertoland.bsky.social
Very happy to share my PhD paper!
www.nature.com/articles/s41...
New preprint! How does meiosis work in non-model organisms? Together with Susana Coelho at the MPI for Biology TΓΌbingen @mpi-bio-fml.bsky.social , we took a look at the proteins of the meiotic axis in the brown alga Ectocarpus www.biorxiv.org/content/10.1...
22.12.2024 16:37 β π 20 π 10 π¬ 2 π 0More than one-third of all family gains were identified during the evolution of streptophyte algae, before the emergence of land plants, and are thus likely to have been significant for plant terrestrialization. 2/2
onlinelibrary.wiley.com/doi/full/10....
Diagram of the TAPscan v4 workflow
Proud to share TAPscan v4, automated annotation of 138 TF families; code, webtool and database available online.
@watertoland.bsky.social @nfdi4plants.bsky.social @jandevries.bsky.social @shiltemann.bsky.social
doi.org/10.1111/tpj....