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Chromatin accessibility data and tool release
Functional epigenomics uses high-throughput sequencing data to study how epigenetic modifications…
In this blog post, we show how chromatin accessibility can be profiled with minimal processing using nanopore sequencing – preserving native structure and capturing rich signal.
Read it here: epi2me.nanoporetech.com/chromatin-ac...
16.06.2025 12:21 — 👍 6 🔁 1 💬 0 📌 1
What’s the power of a pangenome?
Here at the Earlham Institute a lot of people are very excited about pangenomes. But what are they? And how will they change genetics?
📑 Researchers are moving away from a single point of reference to compare multiple genomes against each other, providing a much greater picture of genetic diversity.
🔗 buff.ly/4Kwgz6N
#pangenome #genomics 🖥️ 🧬
17.06.2025 14:11 — 👍 4 🔁 4 💬 0 📌 0
Pangenome-aware DeepVariant https://www.biorxiv.org/content/10.1101/2025.06.05.657102v1
06.06.2025 22:48 — 👍 6 🔁 6 💬 1 📌 0
SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformati... 🧬🖥️🧪 github.com/daewoooo/SVb...
09.06.2025 15:30 — 👍 12 🔁 4 💬 0 📌 0
Roche has given more details of their SBX NGS technology: it'll be called Axelios, and we know it's aimed at competing against Illumina SBS technology, the technology the San Diego company acquired from Cambridge UK Solexa.
I'll give you a second to catch up with it... Axelios vs Solexa....
01.06.2025 13:43 — 👍 37 🔁 10 💬 2 📌 1
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Liv means life in Swedish. So I guess that’s on purpose.
03.01.2025 17:58 — 👍 0 🔁 0 💬 0 📌 0
Dr. Margaret Oakley Dayhoff
I took biochem in 2001, and for nearly 20 years read amino acid sequences daily… and I never knew Dayhoff named them or even the logic behind things like Q until last Friday (h/t Mike Janech). Also, this is another big Dayhoff moment for me. She was incredible!
#proteomics #bioinformatics
24.11.2024 12:39 — 👍 198 🔁 79 💬 14 📌 7
Musse is not my cat
Hope the neighbors don’t see this post .. extremely unlikely.. cause he likes it better here
23.11.2024 01:47 — 👍 5 🔁 0 💬 0 📌 0
Last time I did genetics … GATK was new and the best thing ever. I don’t feel that’s the case anymore, especially with non-model organisms. It’s lacking in parallelism, and I don’t have gold standard sets. So, the new rage is #DeepVariant … but my new favorite is bwa-meme, and containers
23.11.2024 01:24 — 👍 1 🔁 1 💬 0 📌 0
I take my desires for reality because I believe in the reality of my desires
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night clouds lit by low full moon
12.11.2024 20:49 — 👍 1 🔁 0 💬 0 📌 0
News and discussions from scientists associated with the Evolutionary Biology Programme at Uppsala University (Sweden). #EBU #EvoBioUppsala
https://cmdcolin.github.io/awesome-genome-visualization/
Prof. @unibonn.bsky.social. Plant Biotechnology & Bioinformatics (@puckerlab.bsky.social). #Genomics #Bioinformatics #Evolution #SpecializedMetabolism #MolecularBiology #Pigmentation #Flavonoids. Website: https://www.pbb.uni-bonn.de. Views are my own.
civilian drone mapping technology and GIS/spatial data consultant, sometimes journalist and writer, monitors small drones in the Ukraine war, humanitarian-aid adjacent, always annoying online. they/them pronouns. minors DNI
Genetics & Evolution, Faculty at Stanford & Freeman Hrabowski Scholar at HHMI. My views do not reflect those of my employer.
schumerlab.com
New York Times bestselling author and audiobook narrator.
Host of It's Storytime with Wil Wheaton
Retired Starfleet officer.
Husband, father, Traveler.
Nazi punks fuck off.
President of Signal, Chief Advisor to AI Now Institute
Geneticist, Evolutionary Biologist, Interested in human evolution, African history, Professor at Uppsala University
Shitposter with intermittent bursts of sincerity.
Writer, filmmaker. Selective perfectionist. Full-time creative, part-time human. 6'9" - the world is built for Hobbits. Pretty fly for a bi guy. he/him
Seattle
SHOP (see 📌 post): tylerfromtheinternet.com
Author and Johns Hopkins Agora Fellow
https://t.co/Gea41bGhz9
Intelligence & Security Advisor, Co-founder INTIL, OSINT specialist, Fellow Royal Academy of War Sciences, Senior Fellow ISDP, Private account and positions. Regrouped from X early 2025.
Ogillar: Hästar, Potatis och ruiner
Gillar: Fred och Pansarvärnsrobotar
PhD student at the Swedish University of Agricultural Sciences.
Interested in Bioinformatics, Metagenomics and Host-Microbiome interactions
Professor Public International Law and Vice Dean, Faculty of Law, Stockholm University. Affiliated with American University Washington College of Law, the Atlantic Council and CILRAP.
Lead Bioinformatician
Nanopore Sequencing Lab
Institute of Medical Genetics
Medical University of Vienna
Associate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Ancient DNA, evolution, and the human past. Senior group leader leading the research of the Ancient Genomics lab at the Francis Crick Institute. http://www.skoglundlab.org
The best place to find out what’s new in science – and why it matters.
The leading open source orchestrator for containerized, data-intensive pipelines on any infrastructure at any scale. From @seqera.io
