Left to right: CMNS Dean Amitabh Varshney, Rui Yin, CBMG Associate Professor Brian Pierce
Rui Yin (Ph.D. '24, biological sciences) uses #ArtificialIntelligence to design antibodies that can cure previously incurable diseases.
During her Ph.D. at #UMD, Rui developed and applied computer algorithms to better understand the body’s immune response to pathogens and disease ➡️ go.umd.edu/yin
14.10.2025 17:37 — 👍 2 🔁 1 💬 1 📌 0
Foldseek-Multimer—now published in @naturemethods.bsky.social—our fast multimer search tool, enables complex comparisons against the full PDB in seconds. It comes with BFMD, a collection of 300K+ predictions gathered from community projects.
📄 nature.com/articles/s41...
🌐 search.foldseek.com
06.02.2025 08:25 — 👍 145 🔁 63 💬 0 📌 4
#AlphaFold 2 (via TCRmodel2) and AlphaFold3 were both tested for modeling of these new complex structures, and both were able to model them accurately. However, modeling of additionally structurally uncharacterized complexes led to low confidence scores, indicating room for improvement.
22.11.2024 20:57 — 👍 5 🔁 2 💬 0 📌 0
Structural characterization and AlphaFold modeling of human T cell receptor recognition of NRAS cancer neoantigens
Structures of T cell receptor engagement of cancer neoantigens yield insights into specificity and accurate modeling by AlphaFold.
Happy to share this collaborative study with the Mariuzza Lab on structural characterization of #TCR engagement of NRAS cancer neoantigens, now out in Science Advances. This reveals how a human TCR is able to productively engage two different NRAS mutants.
www.science.org/doi/10.1126/...
22.11.2024 20:57 — 👍 2 🔁 0 💬 1 📌 1
Professor in bioinformatics, Stockholm University. Protein structure lover ( interactions predictions, evolution ..). Using machine learning as a part of AI for Sciences for halv my life. In addition to succén, I sometimes rants about sailing or skiing.
Protein Designer | Share Reading Notes (AI+Protein/RNA/DNA)
www.leozang.com
Professor (never Mrs./never misses) Membrane protein evolution and design. Also enzymes.
Stadtman Investigator @ Surgery Branch, NCI | Immunology & Cancer, T Cells & Mutations |
Views don't represent NIH, HHS or US GOV
|🇮🇳🇺🇸| Lab: https://ccr.cancer.gov/staff-directory/sri-krishna
Research Scientist, Veterinarian, Assistant Professor- microbiology, virology, immunology - views my own 🦠🔬🧬🐾🏳️🌈🇬🇧
A coronavirus lab looking for low hanging pebbles and shiny fruit.
Emory University
physicist, interested in biology --- Assoc. Prof. of physics @UW
(Seattle)
Inter-dimensional cancer biologist. Director of the @genomescience.bsky.social at @umbaltimore.bsky.social.
Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Host-pathogen interactions, structural biology, protein design and more. Assistant Professor at Duke University.
www.wrapplab.org
Basketball enthusiast, foodie, and assistant professor
We are the members of the Diamond lab at WUSM: cutting edge virology, immunology and microbiome research, and antiviral vaccine and therapeutics development.
Structural virology / Structure-based vaccine design
mclellanlab.org
Professor of Molecular Biosciences
The University of Texas at Austin
Opinions are my own and not the views of my employer
Structural and molecular immunology and protein biophysics at the University of Notre Dame. T cell receptors, MHC proteins, specificity, and cross-reactivity. Plus drumming, progressive metal, Iron Maiden, and much Rush. Opinions mine alone.
bmblab.nd.edu
Computational structural biologist @Fox Chase Cancer Center. Gay, out & proud since 1986. I support transgender & nonbinary people. Living with CLL/SLL. Video about my LGBTQ+ life in science: https://tinyurl.com/45srzjdw. Views my own, not my employer's.
Johns Hopkins Chemical & Biomolecular Engineering Professor, Co-Director of RosettaCommons, protein engineer, Baltimore resident, father of two. he/him
Investigating viruses, using pipettes, #AI and coffee.
Learn more at the lab website: https://grovelab.github.io/
Check out our database of viral protein structure predictions: https://viro3d.cvr.gla.ac.uk/
Based at: @cvrinfo.bsky.social
We create proteins that solve modern challenges in medicine, technology, and sustainability.
• 2024 Nobel Prize in Chemistry
• University of Washington, Seattle
→ ipd.uw.edu
protein geek, founder and CEO of AI Proteins @aiproteins.com
https://linkedin.com/in/cdbahl
