Roman Joeres

A big round of applause from the SIC to Doctor Kalinina's Drug Bioinformatics group for a successful week at the #ISMBECCB2025 conference! 👏

@guangyichen.bsky.social
@alexandergress.bsky.social
@alperyurtseven.bsky.social
Anastasiia Kolchina
Amay Agrawal
@ok55991.bsky.social

@helmholtzhips.bsky.social ‪
@uni-saarland.de
@saarland-informatics-campus.de
@helmholtzhzi.bsky.social

What an exciting week it's been at the #ISMBECCB2025 conference in Liverpool! | Roman Joeres What an exciting week it's been at the #ISMBECCB2025 conference in Liverpool! The Drug Bioinformatics group, led by Olga Kalinina, had a fantastic presence, with six members presenting their latest wo...

What an exciting week it's been at the #ISMBECCB2025 conference! The Drug Bioinformatics group had a fantastic presence, with six members presenting their latest work across various COSIs.

www.linkedin.com/feed/update/...

This week I presented DataSAIL at the #ISMBECCB2025 conference in #Liverpool
It has been an amazing chance and experience to meet many people working on information leakage. And getting great ideas to extend it

Nicely supervised by & colaborated with @dbblumenthal.bsky.social @ok55991.bsky.social

DataSAIL's "press tour" stops at ISMB/ECCB in Liverpool for a talk and a poster. If you're in ML, come around and check the data splitting out.

I'm looking forward to this and the keynotes by the Nobel Laureates John Jumper and David Baker!

@ok55991.bsky.social @dbblumenthal.bsky.social

Thanks one more time for the great collaboration @dbblumenthal.bsky.social
@ok55991.bsky.social

@helmholtzai.bsky.social
@helmholtzhzi.bsky.social
@helmholtzhips.bsky.social

DataSAIL got accepted as an Oral to the HelmholtzAI Conference in #Karlsruhe

Check out the publication in @NatureComms: www.nature.com/articles/s41...
and the Git Repo: github.com/KalininaLab/DataSAIL

Very happy to see DataSAIL published in @naturecomms.bsky.social. Give it a try if you want to test if your ML models generalize to OOD scenarios. Great collaboration between @uni-saarland.de and @fau.de :-)

DataSAIL is out in @naturecomms.bsky.social
Since the preprint, we have improved the work a lot, thanks to countless reviewers and feedback.

You can find it here: nature.com/articles/s41...

Thanks, @dbblumenthal.bsky.social and @ok55991.bsky.social, for helping and supervising me on this journey.

Your correspondence finds me here

Very nice analysis, thank you!
I assume the absolute numbers are the number of interactions in the whole dataset, but what are the percentages?

last_day == best_day @neuripsconf.bsky.social
The @workshopmlsb.bsky.social is about to start and GIFFLAR will be presented in the poster sessions.
Come for some sweets to the East Meeting Rooms 11 and 12. Poster sessions are at 11:20am and 4pm.
@dbojar.bsky.social #mlsb #NeurIPS2024 #glycotime

@neuripsconf.bsky.social starts today

And for all non-Swedes around: This is what GIFFLAR also can look like

Higher-Order Message Passing for Glycan Representation Learning Glycans are the most complex biological sequence, with monosaccharides forming extended, non-linear sequences. As post-translational modifications, they modulate protein structure, function, and inter...

GIFFLAR is this: A GNN based on Higher-Order Message-Passing for Glycan Representation Learning.
Work conducted together with @dbojar.bsky.social

arxiv.org/abs/2409.13467

What could be a better opportunity to start the bluesky account then a trip to @neuripsconf.bsky.social to present GIFFLAR at @workshopmlsb.bsky.social next Sunday in #Vancouver