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Arjun Dave

@bluebrain.bsky.social

PhD Candidate @Kavli Institute for Systems Neuroscience Exploring norepinephrine locus coeruleus system ๐Ÿง  (and life!)

33 Followers  |  94 Following  |  1 Posts  |  Joined: 29.11.2023  |  1.7562

Latest posts by bluebrain.bsky.social on Bluesky

The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard.

13.08.2025 17:28 โ€” ๐Ÿ‘ 335    ๐Ÿ” 87    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 5
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Check out the poster at OHBM tomorrow and oral presentation on 28th June (ww6.aievolution.com/hbm2501/Abst...)! #OHBM #OHBM2025

25.06.2025 11:36 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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GitHub - spm/spm-python: The Python interface to SPM The Python interface to SPM. Contribute to spm/spm-python development by creating an account on GitHub.

Drumroll... The SPM team will announce that SPM is now fully accessible from Python! ๐Ÿ Learn more about SPM-Python at the SPM roundtable event (Friday, 1pm) and poster number 1841 at #OHBM2025. Try the beta for yourself at github.com/spm/spm-python [2/7]

23.06.2025 08:06 โ€” ๐Ÿ‘ 64    ๐Ÿ” 24    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 4

We are very excited to announce the open release of a new 170 participant dataset: Linked MEG, TMS, multimodal 3T MRI, 7T MRI, Connectom MRI, cognitive /questionnaire data. Immense effort from a fabulous
CUBRIC team. Paper by Carolyn McNabb et al: doi.org/10.1038/s415...

06.02.2025 11:43 โ€” ๐Ÿ‘ 145    ๐Ÿ” 67    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 8
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New paper in Imaging Neuroscience by Clemens Pollak, Martin Reuter, et al:

FastSurfer-LIT: Lesion inpainting tool for whole-brain MRI segmentation with tumors, cavities, and abnormalities

doi.org/10.1162/imag...

04.02.2025 11:16 โ€” ๐Ÿ‘ 25    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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A new Python toolbox called HSSM simplifies working with Hierarchical Sequential Sampling Models (HSSMs) to understand how we accumulate evidence and make choices. Built on PyMC, Bambi, & ArviZ. Check it out! #cognitivescience #python #decisionmaking

edspace.american.edu/openbehavior...

31.01.2025 19:04 โ€” ๐Ÿ‘ 45    ๐Ÿ” 19    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Methods for Analyzing Large Neuroimaging Datasets This Open Access volume explores advancements in methodologies, efficient code management, and scalable data processing of neuroimaging datasets.

This book now available *open access* through Springer Neuromethods: link.springer.com/book/10.1007....

@brainalien.bsky.social and I extend heartfelt thanks to all contributing authors for their exceptional work, w/ special gratitude to Paul Thompson @ptenigma.bsky.social for an inspiring foreword

13.01.2025 12:05 โ€” ๐Ÿ‘ 24    ๐Ÿ” 15    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 3
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Computational Brain & Behavior | Volume 7, issue 4 Volume 7, issue 4 articles listing for Computational Brain & Behavior

โœจ๐Ÿ“ Special issue โ€œWhat Makes a Good Theory? Interdisciplinary Perspectivesโ€, edited by @irisvanrooij.bsky.social @devezer.bsky.social @jcskewes.bsky.social Sashank Varma & Todd Wareham in journal Computational
Brain & Behavior. link.springer.com/journal/4211... ๐Ÿงช

24.12.2024 17:48 โ€” ๐Ÿ‘ 27    ๐Ÿ” 12    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Between-movie variability severely limits generalizability of โ€œnaturalisticโ€ neuroimaging โ€œNaturalistic imagingโ€ paradigms, where participants watch movies during fMRI, have gained popularity over the past two decades. Many movie-watching studies measure inter-subject correlation (ISC), wh...

www.biorxiv.org/content/10.1...

Between-movie variability severely limits generalizability of "naturalistic" neuroimaging.

Not sure about the (over)generalization to all of naturalistic neuroimaging, nor the claim that this severely limits the approach.

But definitely provides food for thought.

10.12.2024 12:52 โ€” ๐Ÿ‘ 44    ๐Ÿ” 17    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 2
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Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography.

Amazing technique by Walsh et al: www.nature.com/articles/s41...

24.11.2024 09:03 โ€” ๐Ÿ‘ 83    ๐Ÿ” 28    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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๐—•๐—ฟ๐—ฎ๐—ถ๐—ป ๐—ฟ๐—ฒ๐—ด๐—ถ๐—ผ๐—ป๐˜€ ๐—ถ๐—ป๐˜ƒ๐—ผ๐—น๐˜ƒ๐—ฒ๐—ฑ ๐—ถ๐—ป ๐˜๐—ต๐—ฟ๐—ฒ๐—ฎ๐˜/๐˜€๐—ฎ๐—ณ๐—ฒ๐˜๐˜†
In a previous fMRI study we use a broad set of regions. Are there other studies that have good sets of ROIs?
Are there some important regions missing from our set?
Thanks.
๐Ÿง 
pmc.ncbi.nlm.nih.gov/articles/PMC...

13.11.2024 17:12 โ€” ๐Ÿ‘ 18    ๐Ÿ” 5    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 0

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