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Margot Bacino

@mbacino.bsky.social

PhD candidate//BCMM trainee ambassador Lynch lab UCSF studying the human oral microbiome in the context of periodontal disease and health πŸͺ₯πŸ¦ πŸ«‘πŸ³οΈβ€πŸŒˆ

107 Followers  |  262 Following  |  11 Posts  |  Joined: 17.11.2024  |  1.6289

Latest posts by mbacino.bsky.social on Bluesky

This is why we fund scientists to study things like oyster slobber even if you don’t think it sounds important

30.09.2025 22:34 β€” πŸ‘ 16833    πŸ” 6364    πŸ’¬ 164    πŸ“Œ 96
For our scientists
YouTube video by Elle Cordova For our scientists

Thanks, @ellecordova.bsky.social. We’re trying. πŸ§ͺ

06.09.2025 19:04 β€” πŸ‘ 71    πŸ” 30    πŸ’¬ 0    πŸ“Œ 2
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How does the immune system prepare for breastfeeding? - Salk Institute for Biological Studies LA JOLLAβ€”Of the 3.6 million babies born in the United States each year, around 80 percent begin breastfeeding in their first month of life. Breastfeeding has known benefits for both mother and child, ...

Exciting new research from @salkinstitute.bsky.social: immune cells migrate from gut to breast during pregnancy and lactation - and microbes play a key role!

🀱🏽🀰🏻🦠πŸ§ͺ

www.salk.edu/news-release...

08.08.2025 02:46 β€” πŸ‘ 36    πŸ” 8    πŸ’¬ 1    πŸ“Œ 1

Each kit comes with enough reagents for I think 5 or 6 library preps so using 4 barcodes instead of 2 shouldn’t strain your resources too much. I have used the same V24 kit for many sequencing runs.

06.08.2025 21:57 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

The reason for this I believe in part is pore occupancy. If it’s sample that you have a lot of DNA you could take each sample split it in two and use four barcodes. After the run you could then just pool the reads for the two barcodes. ONT calls for high input DNA but I’ve run it much lower.

06.08.2025 21:39 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

I am looking for a company with a quick turnaround for peptide synthesis. Any recommendations would be wonderful!

21.07.2025 17:01 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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I have have a great time at @iadr.bsky.social chatting about oral microbes

28.06.2025 12:00 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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MetaPhlAn 4.2.2 release (initial long-read sequencing support and database update) Announcement We are pleased to share that MetaPhlAn 4.2.2 is now available, which incorporates taxonomic profiling of long-read metagenomes for the first time and includes a new version of the MetaPhl...

The new version of MetaPhlAn v4.2.2 released!

πŸ“Œtaxonomic profiling of long-read metagenomes for the first time
πŸ“Œnew version of the MetaPhlAn db (vJan25_202503) containing >21k new SGBs

Try it out & @hutlab.bsky.social and we are looking forward to your feedback!
forum.biobakery.org/t/metaphlan-...

11.06.2025 06:15 β€” πŸ‘ 55    πŸ” 25    πŸ’¬ 2    πŸ“Œ 1

I will be at IADR this week sharing a poster on the 27th in the microbiome section from 3:45-5. I’m curious about the oral microbiome, periodontitis, third generation sequencing approaches, CPR bacteria to name a few!

24.06.2025 15:08 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Home

I had a great time at the annual BCMM retreat learning about my colleagues projects,sharing some of my thesis work, and building community among my fellow microbiome researchers! 🦠🧫🧒 microbiome.ucsf.edu Home | The Benioff Center for Microbiome Medicine

22.06.2025 17:53 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Graduate Students Push Back Against Science Funding Cuts Hundreds of graduate students are writing to their hometown newspapers to defend their research, as the Trump administration drastically reduces science funding.

Graduate Students Push Back Against Science Funding Cuts www.nytimes.com/2025/06/16/s...

16.06.2025 22:53 β€” πŸ‘ 80    πŸ” 26    πŸ’¬ 1    πŸ“Œ 2
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Exciting progress! In our new preprint, we show that episymbiont Saccharibacteria can directly modulate epithelial immunityβ€”a big step in understanding how these elusive microbes interact with the human host. Kudos to Deepak Chouhan and our amazing collaborators! www.biorxiv.org/content/10.1...

03.06.2025 12:30 β€” πŸ‘ 14    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0

You/your team should fact check your podcasts before they’re released. There are so many people go to you as a source of scientific truth.

11.06.2025 05:09 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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I had a great time at @nanoporetech.com WYMM Tour: Bay Area yesterday. It was lovely connecting with other researchers and sharing a little bit of my thesis work. πŸͺ₯πŸ§¬πŸ‘©πŸΌβ€πŸ”¬

06.06.2025 16:28 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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WYMM: Bay Area What you're missing matters. Stay on top of what's next.​ Hear about the latest technical updates for Oxford Nanopore Technologies as well as talks from local scientists about their latest work using ...

πŸ§ͺ I will be presenting some of my research on the oral microbiome at @nanoporetech.com WYMM tour: Bay Area This coming Thursday June 5th. I hope to see you there! 🦷🧫🫑

nanoporetech.com/about/events...

29.05.2025 15:23 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Science Advances’ special issue on women’s health highlights a growing wave of research focusing on women’s unique biological and psychological experiences. Articles cover a range of studies from the interplay between menopause and Alzheimer’s risk to the menstrual cycle’s influence on the brain-heart connection. It also describes the opportunities pregnancy provides to research aspects of both physical and mental health. By prioritizing women’s unique physiological and psychological experiences, research can expand the frontiers of knowledge in ways that benefit everyone.

Science Advances’ special issue on women’s health highlights a growing wave of research focusing on women’s unique biological and psychological experiences. Articles cover a range of studies from the interplay between menopause and Alzheimer’s risk to the menstrual cycle’s influence on the brain-heart connection. It also describes the opportunities pregnancy provides to research aspects of both physical and mental health. By prioritizing women’s unique physiological and psychological experiences, research can expand the frontiers of knowledge in ways that benefit everyone.

A special issue on #WomensHealth in #ScienceAdvances highlights a growing wave of research focusing on women’s unique biological and psychological experiences.

Learn more: scim.ag/3R59fPe (THREAD 🧡)

11.03.2025 19:46 β€” πŸ‘ 293    πŸ” 83    πŸ’¬ 4    πŸ“Œ 12
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Welcome to the Bluesky account for Stand Up for Science 2025!

Keep an eye on this space for updates, event information, and ways to get involved. We can't wait to see everyone #standupforscience2025 on March 7th, both in DC and locations nationwide!

#scienceforall #sciencenotsilence

12.02.2025 17:04 β€” πŸ‘ 11534    πŸ” 5480    πŸ’¬ 291    πŸ“Œ 677
A conceptual illustration of worried scientists at computers. Hedline reads: I'm an NIH-funded researcher, drowning in uncertainty

A conceptual illustration of worried scientists at computers. Hedline reads: I'm an NIH-funded researcher, drowning in uncertainty

"How do you strategize around an unpredictable funding landscape?" #ScienceWorkingLife https://scim.ag/4gPIkBz

24.02.2025 17:35 β€” πŸ‘ 77    πŸ” 24    πŸ’¬ 0    πŸ“Œ 2
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Tooth Mineralization , Periodontal Health & the Oral Microbiome with MargΓ΄t Bacino! Let's Get Oral Β· Episode

πŸ§ͺ Great conversation with Let’s Get Oral podcast! open.spotify.com/episode/7qDa...

16.01.2025 19:50 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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How the Oral Microbiome is Connected to Overall Human Health Oral health has long been siloed from the rest of a person's health. But increasingly, researchers and clinicians, including those at UCSF, are finding ties between a person's oral health and their ov...

πŸ§ͺ What I’ve been working on the past 4 years. More exciting research to come! www.ucsf.edu/news/2024/10...

28.11.2024 15:25 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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You can reduce your risk of dementia. Here's how to get started About 40% of dementia cases could be prevented or delayed by healthy lifestyle choices and preventive medicine. Here's a tool to gauge your brain care and track your progress.

About 40% of dementia cases could be prevented or delayed by healthy lifestyle choices and preventive medicine. Here's a tool to gauge your brain care and track your progress.

25.11.2024 16:14 β€” πŸ‘ 1138    πŸ” 210    πŸ’¬ 43    πŸ“Œ 20

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