David Hoksza

Screenshot of PrankWeb.

🚀 Our paper on the updated PrankWeb, a web app for protein binding site prediction using P2Rank, is out in
@narjournal.bsky.social. Now with docking integration!

👨‍💻 Try it: prankweb.cz
📄 Paper: doi.org/10.1093/nar/...
💻 GitHub: github.com/cusbg/prankweb

Developed at @cusbg.bsky.social

10.06.2025 15:09 — 👍 24    🔁 7    💬 2    📌 2

Binformatics seminar Petr Daněček David Hoksza Marian Novotný

Join us for the next #Bioinformatics seminar hosted by
@sciencecharles.bsky.social and @mff.unikarlova.cuni.cz. Nora Martin from CRG : “How does the structure of a genotype-phenotype map shape variation and evolutionary processes?”.

📅 Wed, Apr 30
🕕 17:20

bioinformatics.cuni.cz/seminar

28.04.2025 15:59 — 👍 7    🔁 4    💬 0    📌 0

conference is well attended ;)

1st @elixircz.bsky.social PhD conference at Telč on 27-28th March 2025 superthread.

27.03.2025 15:28 — 👍 8    🔁 3    💬 1    📌 0

GitHub - davidhoksza/bibtex-pubmed-links: Adds PubMed/PMC/DOI links to BibTeX records Adds PubMed/PMC/DOI links to BibTeX records. Contribute to davidhoksza/bibtex-pubmed-links development by creating an account on GitHub.

If you’re submitting to the @narjournal.bsky.social Web Server/Database issue and need to add PMC and DOI links to your #BibTeX as required—but the provided Perl script isn't working—I’ve created a small Python script to help you out!

🔗 github.com/davidhoksza/...

16.02.2025 09:15 — 👍 5    🔁 2    💬 0    📌 0

Excited to announce the upcoming @elixircz.bsky.social PhD Conference in #Bioinformatics, #Chemoinformatics, and #ComputationalBiology! Join us for 2 days of student presentations, a posters, and insightful discussions with distinguished scientists. 🧬https://bioinformatics.cuni.cz/phdconf2025

13.02.2025 08:29 — 👍 9    🔁 3    💬 1    📌 0

🚀 New Paper Alert! 🚀

𝐑𝟐𝐃𝐓: a comprehensive platform for visualising RNA secondary structure

Check it out in @narjournal.bsky.social:
academic.oup.com/nar/article/...

Here’s why you should give it a try 🧵👇

10.02.2025 14:38 — 👍 15    🔁 7    💬 2    📌 0

Binformatics seminar Petr Daněček David Hoksza Marian Novotný

Join us for the next #Bioinformatics seminar hosted by @sciencecharles.bsky.social and MFF UK. Gerardo Tauriello from SIB: “Beyond SWISS-MODEL - Modelling, Benchmarking and Working with Computed Structure Models in the AlphaFold Era”.

📅 Fri, Jan 17, 10:00

bioinformatics.cuni.cz/seminar

11.01.2025 21:06 — 👍 7    🔁 2    💬 0    📌 0

Binformatics seminar Petr Daněček David Hoksza Marian Novotný

Join us for the next #Bioinformatics seminar hosted by
MFF UK and @sciencecharles.bsky.social. Karel Sedlář from
VUT will present on “Computational Analyses and Functional Annotations of Non-Model Bacteria”.

📅 Wed, Dec 11
🕕 17:20
🏛️Malostranské nám. 25

bioinformatics.cuni.cz/seminar

09.12.2024 12:13 — 👍 4    🔁 1    💬 0    📌 0

Pokud vás zajíma bioinformatika a zvažujete její studium, tak se určitě stavte u našeho stánku na Dni otevřených dveří MFF UK... a pokud nemáte čas, tak mrkněte na video o našem programu ve spolupráci s @sciencecharles.bsky.social

www.mff.cuni.cz/cs/uchazeci/...

www.youtube.com/watch?v=u2pi...

27.11.2024 18:52 — 👍 5    🔁 1    💬 0    📌 0

Join us for the next #Bioinformatics seminar hosted by
the Faculty of Mathematics and Physics, Charles University. Anu Shivalikanjli from @ebi.embl.org will present on “Mapping Molecular Phenotypes with MorPhiC”. Don’t miss it!

📅 Wed, Nov 27
📷 17:20

More info: bioinformatics.cuni.cz/seminar

25.11.2024 10:27 — 👍 5    🔁 2    💬 0    📌 0