GitHub - brandcm/VCF_derived_allele_frequency_annotation
Contribute to brandcm/VCF_derived_allele_frequency_annotation development by creating an account on GitHub.
Kicking off work in the new year with code updates for VCF annotation with derived allele frequencies: github.com/brandcm/VCF_.... One can now specify which samples to include in the calculation. There's also a new script to update an annotation after genotype filtering. Feedback is very welcome.
06.01.2025 19:45 — 👍 5 🔁 1 💬 0 📌 0
Good morning SF
14.12.2024 17:55 — 👍 1 🔁 0 💬 0 📌 0
Evolutionary biologist interested in how the genome works and which changes lead to phenotypes. Computational Scientist at Colossal Biosciences 🦤
Theoretical biologist and advisor to data scientists at the University of Arizona. Mostly theoretical population genetics and molecular evolution, but I've also published in biochemistry, infectious disease, aging, economics, education. Opinions are my own
PhD student at MPI-EVA, interested in population genetics, Neandertals and Early Modern Humans
Interested in prehistory, human evolution, population genetics and much more. Scientist @ Max Planck Institute for Evolutionary Anthropology
Radiation oncologist • Director of #radonc #informatics @UCSFCancer.bsky.social • Computational scientist @ucsf-bchsi.bsky.social @ucjointcph.bsky.social
Data and AI -> cancer care
clone wars historian • LEGO collector • BBQ amateur
honglab.ucsf.edu
Wildlife Ecologist. Passionate about open science, scientific publishing, & peer review. Founder of @StacksJournal.bsky.social, a scientific journal designed ease & ethics.
Learn More & Join Us ⬇️
https://www.stacksjournal.org
MBBS, MD, PhD | GWAS storyteller | Scientist at Regeneron | Human genetics & drug discovery in Neuroscience & Psychiatry
Bioanthropologist interested in osteology, paleopathology, history of anthropology, ethics, curation practices, and women in science. Feminist and setting my own path in science. She/her
Professor at UCLA in Ecology & Evolutionary Biology as well as Human Genetics.
Traffic Ninja. Occasional runner...
https://lohmueller.eeb.ucla.edu
machine learning and functional/statistical genetics. Associate Prof @Columbia and Core Faculty @nygenome. he/him/his. https://daklab.github.io/
Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Associate Professor at USC, Center for Genetic Epidemiology. Population genetics, statistical genetics & human genetics/genetic epidemiology. A city, mountain, dance, candy & a drosophila gene. UCLA->Harvard->UCLA->USC.
http://chianglab.usc.edu
Scientist, educator, parent . . . not necessarily in that order. All opinions are mine, mine, mine.
Associate Professor at USC. Genetics/Stats/ML. Husband and father. GA➡️CA. He/him. Views are mine.
www.mancusolab.com
Associate prof. at UCLA
garud.eeb.ucla.edu
Computational population geneticist, evolutionary systems biologist, Department Head, educator, mentor, father, husband, triathlete, alpine skier.
http://gutengroup.mcb.arizona.edu
Views expressed are my own, not those of my employer.
Assistant professor in quantitative and computational biology @USC. Genetics, evolution, statistics. https://edgepopgen.github.io/edgelab/
Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
