Timothe Rouze @tmthrz - Bluesky Profile

Latest posts by tmthrz.bsky.social on Bluesky

REINDEER2: practical abundance index at scale https://www.biorxiv.org/content/10.1101/2025.06.16.659990v1

17.06.2025 13:46 — 👍 8 🔁 7 💬 0 📌 2

The sequence analysis session of #RECOMB2025 is off to a great start with @jimshaw.bsky.social presenting devider, a new algorithm for haplotyping small sequences from long-read sequencing.

www.biorxiv.org/content/10.1...

27.04.2025 01:27 — 👍 26 🔁 6 💬 1 📌 0

Igor and Lucas on Recomb's stage presenting their work

Continuing with @imartayan.bsky.social and Lucas Robidou presenting Hyper-k-mers a novel efficient streaming k-mers representation. A joint work with @npmalfoy.bsky.social and Yoshihiro shibuya

27.04.2025 01:45 — 👍 11 🔁 6 💬 0 📌 1

@bonsaiseqbioinfo.bsky.social friends in Seoul @rayanchikhi.bsky.social @imartayan.bsky.social @tmthrz.bsky.social 🫰🏻🫰🏻🫰🏻

25.04.2025 07:50 — 👍 16 🔁 3 💬 1 📌 0

@camillemrcht.bsky.social is back on stage to present Vizitig, an interactive visualization tool for sequencing datasets developped by @bdegardins.bsky.social

25.04.2025 05:45 — 👍 4 🔁 6 💬 1 📌 0

bsky.app/profile/imar...

25.04.2025 05:11 — 👍 2 🔁 1 💬 1 📌 0

Now our @tmthrz.bsky.social presenting his approach for compressing collections of unitigs - Rayan Chikhi 🤝🏻 @npmalfoy.bsky.social

25.04.2025 05:13 — 👍 5 🔁 4 💬 1 📌 0

Thrilled to have @aliciao.bsky.social as a keynote in @recombseq.bsky.social today!! #RECOMBseq

25.04.2025 00:40 — 👍 11 🔁 4 💬 1 📌 0

👋🏻💻🧬

10.02.2025 14:40 — 👍 5 🔁 6 💬 0 📌 1

Fractional hitting sets for efficient multiset sketching - Algorithms for Molecular Biology The exponential increase in publicly available sequencing data and genomic resources necessitates the development of highly efficient methods for data processing and analysis. Locality-sensitive hashi...

link.springer.com/article/10.1... our article on large scale comparison of datasets in a Minhash-like setting, but for heterogenous document sizes AND keeping lexicographic information, is out in AMB. By @tmthrz.bsky.social @imartayan.bsky.social @camillemrcht.bsky.social @npmalfoy.bsky.social

10.02.2025 15:09 — 👍 4 🔁 3 💬 0 📌 0

@tmthrz is following 20 prominent accounts

Chloé Baudin
@chloebdn

PhD student trying to do interactomics and top-down 🔬 📍🇫🇷 Lille

Sumaiya Nazeen
@snz20

Postdoctoral Research Fellow, DBMI, HMS, Neurology, BWH Sudarsky Scholar'22 MIT EECS SM'14, PhD'19 Fulbright S&T Fellow'12 Ludwig Center Fellow'15 She/Her/Hers

@lbartels7

Gu Zhenhao
@guzhenhao

PhD student at NUS Computing, interested in algorithms for Computational Biology.

Alexander Petri
@alexanderjpetri

PHD student in Computational Mathematics @ Stockholm University, developing algorithms for long read sequencing data, github: https://github.com/aljpetri/

Ryan Teo
@teojcryan

Computational Biology PhD Student at the University of Birmingham. (Meta)genomic pathogen surveillance, infectious disease modelling, and BW disarmament. 🇬🇧/🇸🇬

Pavel Veselý
@pavelvesely

Computer scientist at Charles University, Prague 🇨🇿 I like all kinds of efficient algorithms and data structures for large datasets || also ⛰️🇺🇦https://iuuk.mff.cuni.cz/~vesely/

Li Song
@mourisl

毛利元光. Assistant Prof at the Department of Biomedical Data Science at Dartmouth College. Research on bioinformatics, algorithms. Lab page: mourisl.github.io

Florian Ingels
@fingels

Ph.D. in Mathematics Currently postdoc at @bonsaiseqbioinfo.bsky.social, in Lille. Investigating patterns (substructures) in structured data (sequences, trees, graphs) of predominantly biological origin. More at https://fingels.github.io/

Bonsai Sequence Bioinformatics
@bonsaiseqbioinfo

Research group in Lille, Fr.

Bastien Degardins
@bdegardins

PhD student at @univlille.bsky.social Graph visualisation for RNA and DNA sequences and databases

kamil hepak 🦉
@kmlhpk

interested in algorithmic bioinformatics 💾🧬

Antoine Limasset
@npmalfoy

Karel Břinda
@brinda.eu

‖ Permanent Researcher / INRIA Start. Faculty @ INRIA Rennes 🇫🇷 ‖ BioInfo/CompBio: algorithms, genomics, pathogens & rapid diagnostic of antibiotic resistance《 https://brinda.eu | https://github.com/karel-brinda 》

@gaellebaudemont

bioRxiv Genomics
@biorxiv-genomic

Laurent Jacob
@laurentjacob

Researcher in statistics and machine learning for genomics https://laurent-jacob.github.io/

Mikaël Salson
@mikael-salson.univ-lille.fr

Working on heuristics and data structures for the analysis of genomic data (@bonsaiseqbioinfo.bsky.social, CRIStAL, ULille). Teaching computer science, bioinformatics and scientific methods at ULille. https://mikael-salson.univ-lille.fr

Camila Duitama
@camiladuitama

Bioinformatics🧬👩🏽‍💻 and politics👈. Decolonial, anticapitalist, anti imperialist and migrant from 🇨🇴currently living in 🇫🇷. Un corazón de mango 🥭 del Sinú.

Edwy Plenel
@edwyplenel

Journaliste, cofondateur de Mediapart [www.mediapart.fr]