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Emma Doud

@fireinlab.bsky.social

Mass spectrometry, proteomics, Midwesterner. Views are my own.

262 Followers  |  638 Following  |  42 Posts  |  Joined: 31.05.2023  |  1.7366

Latest posts by fireinlab.bsky.social on Bluesky

We were yelling this at the TV. And then it was not even real news! I will just go find big ten basketball instead NBC.

11.02.2026 03:01 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Happy dog in snow.

26.01.2026 00:59 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Unlocking the Next Decade of Proteomics with Standardized, Structured Metadata The proteomics community has fully embraced data sharing, yet data set metadata provision remains limited, especially at the level of the biological samples and experimental design. This hampers large...

This proteomics banger from @compomics.com and @ebi.embl.org folks looks great. It is one of those titles that makes some people really excited and others let out an audible groan (I’m in the former).

pubs.acs.org/doi/full/10....

25.01.2026 12:56 β€” πŸ‘ 7    πŸ” 3    πŸ’¬ 2    πŸ“Œ 0
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Auroral substorm in Fairbanks, Alaska

23.12.2025 15:46 β€” πŸ‘ 3355    πŸ” 478    πŸ’¬ 54    πŸ“Œ 19
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#AminoAcidAdvent Day 1: Proline

The kinkiest of amino acids (NSFW!), synthesized from glutamic acid, and some even call it the simplest "enzyme". Regardless, its a pro move to include the hydroxyproline variable mod if your abundant proteins have collagen domains... really, do this.

04.12.2025 12:50 β€” πŸ‘ 14    πŸ” 5    πŸ’¬ 2    πŸ“Œ 1

IUSM center for proteome analysis working with the excellent @baucumlab.bsky.social yet again for #teammassspec!πŸ’“

05.12.2025 18:55 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

The newest preprint from the Baucum lab is out. Check it out :).

11.10.2025 02:18 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Striatal spinophilin enhances D2R interaction with cytosolic proteins to mediate persistent D2R agonist-induced locomotor suppression. https://www.biorxiv.org/content/10.1101/2025.09.09.675136v1

15.09.2025 16:16 β€” πŸ‘ 0    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Great science happening at IUSM!

16.09.2025 14:22 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Targeted Harassment of Faculty The AAUP has developed a toolkit to address the threat of targeted harassment of faculty.

@aaup.org has prepared materials for faculty who face these threats and harassment. 6/ www.aaup.org/issues-highe...

13.09.2025 15:34 β€” πŸ‘ 920    πŸ” 269    πŸ’¬ 2    πŸ“Œ 10

Still working ok here at Indiana University one state South.

10.09.2025 19:09 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Mass Spectrometry Technology Specialist, MiΔ™dzynarodowy Instytut Biologii Molekularnej i KomΓ³rkowej w Warszawie, Warszawa Job offer Mass Spectrometry Technology Specialist, MiΔ™dzynarodowy Instytut Biologii Molekularnej i KomΓ³rkowej w Warszawie, Warszawa

🀩 JOB ALERT 🀩 Come work with me and two cutting-edge LC-MS/MS systems at our brand new Mass Spectrometry Facility @iimcb.bsky.social in Warsaw! Apply here tinyurl.com/y47mzafa or send any questions my way. #TeamMassSpec please share widely!

31.07.2025 15:01 β€” πŸ‘ 15    πŸ” 9    πŸ’¬ 1    πŸ“Œ 1
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Disulfide bonds are critical for stabilizing cell division, cell envelope biogenesis, and antibiotic resistance proteins in mycobacteria | mBio This work addresses a major deficiency in understanding mycobacterial cell envelope processes and highlights the biological and clinical implications of oxidative protein folding in mycobacteria. This...

Great collaboration with my Bloomington colleague @cris-s.bsky.social out now in #mbio #teammassspec journals.asm.org/doi/10.1128/...

31.07.2025 13:06 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Picture of a smiling person holding up a copy of a book.

Picture of a smiling person holding up a copy of a book.

First copies of my book are here!! As a new faculty member, I realized that in addition to my research job, I also had a leadership job…and I wasn’t prepared for that.

This book is the guide I wish I’d had then, with the goal of helping others now.
Β 
jenheemstra.com/book

26.07.2025 17:35 β€” πŸ‘ 310    πŸ” 65    πŸ’¬ 12    πŸ“Œ 5
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Analytical development and application of a targeted liquid chromatography-tandem mass spectrometry assay for chimeric aducanumab A sensitive and specific liquid chromatography-tandem mass spectrometry assay was developed for the quantification of chimeric aducanumab (chAdu), a therapeutic antibody targeting pathological amyl...

Success! We've now run almost 2000 mouse cortex and plasma samples through this assay so expect more publications referencing it very soon. Much thanks to the Skyline team and @maccoss.bsky.social #modelad #teammassspec #proteomics www.tandfonline.com/doi/full/10....

25.07.2025 19:16 β€” πŸ‘ 17    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

The most recent streetview of the site has a nature preserve boundary sign still displayed more than two years after the transfer of the property.

13.07.2025 21:04 β€” πŸ‘ 12    πŸ” 3    πŸ’¬ 2    πŸ“Œ 0

I love my neighborhood and the people fighting for the good stuff in it.

01.07.2025 23:28 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Position of flask on magnetic stirrers can drastically affect reproducibility of experiments Comprehensive examination reveals improper siting of reaction vessels can affect catalyst formation, alter nanoparticle formation and change yields

New research shows that simply changing how a reaction vessel is positioned on a magnetic stirrer can significantly change a reaction's speed and product quality, influencing the reproducibility of results. #ChemSky #ScienceSky #EduSky

26.06.2025 14:35 β€” πŸ‘ 26    πŸ” 12    πŸ’¬ 3    πŸ“Œ 8
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Meet the Anti-Vax ACIP First Round Draft Picks of 2025! It's MAHA fantasy season, so let's take a look at this year's rookie class. Which preventable disease will start killing children first?

I did my own research ahead of next week's ACIP meeting
rasmussenretorts.substack.com/p/meet-the-a...

19.06.2025 12:50 β€” πŸ‘ 181    πŸ” 80    πŸ’¬ 10    πŸ“Œ 11
LinkedIn This link will take you to a page that’s not on LinkedIn

🚨 Has PRIDE helped your research?

Take 15 mins to tell funders why open data matters!
πŸ“Š Fill out the EMBL-EBI 2025 survey πŸ‘‰
www.surveymonkey.com/r/QGFMBH8?ch...

Your feedback helps keep PRIDE open, FAIR & impactful.
πŸ™ Please share!
#FAIR #OpenData #Proteomics #MassSpectrometry #PRIDE

18.06.2025 06:02 β€” πŸ‘ 10    πŸ” 12    πŸ’¬ 0    πŸ“Œ 0
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Quick PSA: If you are planning a trip to Fairbanks this upcoming aurora season, the extra hours of darkness in Dec-Jan likely won't help you. In Fairbanks under quiet conditions, auroras usually don't start to appear until 9-10 pm.

06.06.2025 12:52 β€” πŸ‘ 174    πŸ” 11    πŸ’¬ 2    πŸ“Œ 0

We have had olink up and running in our center for about 6 months- I'll be encouraging all researchers who generate data with us to upload!

04.06.2025 13:59 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
An infographic labeled "Should I buy this plant? a bug-approved guide" 

It takes you through the following line of questioning "1. Is it native: Look at the name of the plant here and see if it's native to your region. If no, Is it good at feeding bugs? Some non-native make lots of nectar. You can google if unsure. If yes, Are there better options available? if yes, don't buy it. If no, buy it. Ok, let's go back to the top. If it IS native, is it a cultivar? Does it have a goofy name like "Daisies jubilee" or "Pink Flamingo Hibiscus" It's a cultivar. If it's a cultivar, it'll send you to are there better options available? If it's not, on to question 3, which is "Was it grown with pesticides? This can be hard to tell. Check with the origin nursery. If yes, are there better options. If no, "Hell yeah". 

There are little flowers on a bunch of the boxes. The Hell Yeah box has a swallowtail butterfly with sunglasses giving a thumbs up. The no has a sassy bee looking over its sunglasses at you judgementally with its hand on its hips.

On the bottom is says "Need help? Text questions to 9-RUNG-SQUID

An infographic labeled "Should I buy this plant? a bug-approved guide" It takes you through the following line of questioning "1. Is it native: Look at the name of the plant here and see if it's native to your region. If no, Is it good at feeding bugs? Some non-native make lots of nectar. You can google if unsure. If yes, Are there better options available? if yes, don't buy it. If no, buy it. Ok, let's go back to the top. If it IS native, is it a cultivar? Does it have a goofy name like "Daisies jubilee" or "Pink Flamingo Hibiscus" It's a cultivar. If it's a cultivar, it'll send you to are there better options available? If it's not, on to question 3, which is "Was it grown with pesticides? This can be hard to tell. Check with the origin nursery. If yes, are there better options. If no, "Hell yeah". There are little flowers on a bunch of the boxes. The Hell Yeah box has a swallowtail butterfly with sunglasses giving a thumbs up. The no has a sassy bee looking over its sunglasses at you judgementally with its hand on its hips. On the bottom is says "Need help? Text questions to 9-RUNG-SQUID

I'm working on a quickstart guide for people who want to plant native plants, but don't know all the things to consider when choosing plants.

I think this is inherently challenging due to the absolute mountain of caveats that goes into doing this properly.

However.

Here's where we're at.

03.06.2025 13:07 β€” πŸ‘ 247    πŸ” 64    πŸ’¬ 22    πŸ“Œ 3
quantms - Quantitative Mass Spectrometry Analysis A bioinformatics best-practice analysis pipeline for Quantitative Mass Spectrometry (MS)

πŸš€ We're launching quantms.org β€” new hub for all #quantms related projects. Explore its components #pmultiqc & #ibaqpy, and check all reanalysis we're sharing with the community: quantms.org/datasets

Meet the Team and Labs behind the project
πŸ‘‰ quantms.org/about

#OpenSource #Proteomics #ASMS2025

02.06.2025 15:39 β€” πŸ‘ 18    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0

Genuinely delighted that @unbreaking.org is now doing our work in public. I cannot tell you what it means to be a part of it, or how much its already helped me. If my Meeting the Moment newsletter has helped you, Unbreaking is going to bowl you over. So much more ambitious and helpful. Join us!

19.05.2025 18:56 β€” πŸ‘ 211    πŸ” 62    πŸ’¬ 4    πŸ“Œ 0

Haven't seen my other #teammassspec folks share this xkcd enough

30.05.2025 14:52 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Bionalysis Rising Stars Final Candidates are now live! You might recognize at least one. You can vote here! www.bioanalysis-zone.com/bioanalysis-...

20.05.2025 19:55 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

Thank you! I noticed some of these going public and it is appreciated- it's really hard when the person uploading is not an author and so I don't always know when the paper is finally published πŸ˜€

08.05.2025 14:35 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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a man laying on a red couch with the words " i want that one " on the bottom ALT: a man laying on a red couch with the words " i want that one " on the bottom

I will have to assume it was a Dan Flash special.

06.05.2025 19:41 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Do this!

30.04.2025 14:00 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

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