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Chaney Kalinich

@chaneykalinich.bsky.social

Med student @Yaleschoolofmed and researcher @YaleEMD | into public health, pathogen genomics, field hockey, rock climbing, and Wikipedia rabbit holes

69 Followers  |  165 Following  |  2 Posts  |  Joined: 21.12.2024  |  1.407

Latest posts by chaneykalinich.bsky.social on Bluesky

Tiled Amplicon Sequencing Enables Culture-free Whole-Genome Sequencing of Pathogenic Bacteria From Clinical Specimens https://www.biorxiv.org/content/10.1101/2024.12.19.629550v1

20.12.2024 19:35 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I've been working (along with Freddy Gonzalez, Seth Redmond, and many others) on this for a couple of years now, and I'm so excited to begin sharing our results!

21.12.2024 00:50 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Finally got on Bluesky to share some work I'm really proud of...

Using a tiled amplicon approach, we were able to sequence TB directly from sputum, without culture. This could help make WGS of TB (which can take weeks to culture) much faster at a similar price point to widespread SC2 sequencing.

21.12.2024 00:50 โ€” ๐Ÿ‘ 22    ๐Ÿ” 11    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0

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