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Abbas Zaki

@abbasz.bsky.social

Engineer pretending to be a biologist | PhD candidate @ UTSW | making photosynthetic mammalian cells | posting through the PhD

52 Followers  |  92 Following  |  41 Posts  |  Joined: 17.10.2024  |  1.7363

Latest posts by abbasz.bsky.social on Bluesky

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Yesterday at the "Planetary #CellBiology" session of #CellBio2025, chaired by Amy Gladfelter, we explored how cell and #MolecularBiology discoveries connect to planetary health, informed by voices from science, education and funding. πŸ§ͺ American Society for Cell Biology

08.12.2025 06:49 β€” πŸ‘ 18    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0

This would be such a fun journal to read πŸ™‚β€β†•οΈ

07.12.2025 05:05 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

One of these, thiovolum imperiosus is fascinating:
- multiple copies of their genome but they’re nearly identical
- almost everything in the cell is in a thin layer of peripheral cytoplasm and the middle is a large compartment that organizes the cell together with membrane invaginations

07.12.2025 05:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Crazy stats included:
- just 5% of bacteria account of 90% of 🦠 pubs
- >90% of 🦠 remain uncultured
- some bacteria can grow to be 20,000 um which is WILD on its own but
- this isn’t even uncommon bc multiple species of HUGE bacteria (>50 um) exist

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Couldn’t stay away from the weird lil cells at extremes though and went back to @vollandlab.bsky.social talk and it did not disappoint

07.12.2025 05:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

More impressively, vitamin B3 supplementation even rescued KO mice showing this is a very cool platform to identify possible translational therapies with real effects!

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Probably overusing the word but this was honestly so elegant! The idea that you can do a CRISPR screen and add vitamins to see which monogenic diseases might be treatable with vitamins is just *chef’s kiss* πŸ‘ŒπŸ½

07.12.2025 05:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Another really cool talk I had the pleasure of catching in the β€œAdapating Cellular Machines to Cellular Context” session was by @ishahjain.bsky.social showcasing a new way of fighting metabolic disorders

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Really neat framework for how ELVAs store aggregates and later degrade when they mature to eggs and how that might help reduce metabolic demands to keep ELVAs in a constant degradative state

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

But really neat how the lysosome is getting a break from its rep as the πŸ—‘οΈ of the cell and even crazier how ELVAs can be 10s of microns but still behave liquid-like and not depend on microtubules

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Honestly was just struck by how huge (100 um 🀯) oocytes can be and what that means for coordinating cargo trafficking at that scale

07.12.2025 05:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

So many amazing talks at day 1 of #cellbio2025 was absolutely torn between sessions but managed to catch @gzaffagnini.bsky.social discussing how oocytes maintain proteostasis with endolysosomal vesicular assemblies (ELVAs)

07.12.2025 05:03 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0

Absolutely wild that single celled organisms can coordinate such complex interactions 🀯

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Even more interestingly though, stentors oscillate between partners instead of sticking with one buddy. Since flow velocity might be higher for one stentor than another, this might help prevent suboptimal pairings by spreading interactions to multiple partners aka β€œeating family style”

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Super elegant use of particle image velocimetry to show stentors together generate almost 2x faster flow towards each to improve feeding

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Really loved the comparison to actin self-assembly but with ridiculously large (250 um 😱) cells

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Switching gears to how cells work together, @sshekhr.bsky.social gave a beautiful talk on stentors and how hydrodynamics influence cooperativity πŸŒ€

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Also just cool to be reminded that in addition to being fun lil guys, fungi interactions matter to better develop anti-fungals and secondary metabolites

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Next up @mjhays.bsky.social talked about killer yeast that secrete toxins to kill neighboring cells ☠️ Really elegant experiments comparing coevolution vs asymmetric evolution to show it’s really coevolution driving resistance!

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Also so cool that 1 out of 3 cells in the 🌊 are archaea 🀯

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Had no clue archaea could fuse lipid bilayers to make membrane spanning monolayers or methylate to adapt to ❄️ temps (by archaea standards anyway)

07.12.2025 04:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Just bonkers cool stuff at #cellbio2025 β€œCells at the Extremes” session starting with Andy Garcia giving a great talk on how archaea modify their membranes to survive extreme habitats 🌑️

07.12.2025 04:24 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 3    πŸ“Œ 0

Absolutely wild that single celled organisms can coordinate such complex interactions 🀯

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Even more interestingly though, stentors oscillate between partners instead of sticking with one buddy. Since flow velocity might be higher for one stentor than another, this might help prevent suboptimal pairings by spreading interactions to multiple partners aka β€œeating family style”

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Super elegant use of particle image velocimetry to show stentors together generate almost 2x faster flow towards each to improve feeding

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Really loved the comparison to actin self-assembly but with ridiculously large (250 um 😱) cells

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Switching gears to how cells work together, @sshekhr.bsky.social gave a beautiful talk on stentors and how hydrodynamics influence cooperativity πŸŒ€

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Also just cool to be reminded that in addition to being fun lil guys, fungi interactions matter to better develop anti-fungals and secondary metabolites

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Next up Michelle Hays talked about killer yeast that secrete toxins to kill neighboring cells ☠️ Really elegant experiments comparing coevolution vs asymmetric evolution to show it’s really coevolution driving resistance!

07.12.2025 04:17 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Also so cool that 1 out of 3 cells in the 🌊 are archaea 🀯

07.12.2025 04:17 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

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