Gillian Chu @gillianychu - Bluesky Profile

Gillian Chu

@gillianychu.bsky.social

Computer science PhD candidate. Raphael Lab, Princeton. Designing probabilistic models for evolutionary biology. | gillichu.github.io | Free time spent running, volunteering, and on side projects.

20 Followers | 66 Following | 4 Posts | Joined: 16.11.2024 | 1.4976

Latest posts by gillianychu.bsky.social on Bluesky

Maximum likelihood inference of time-scaled cell lineage trees with mixed-type missing data using LAML - Genome Biology Dynamic lineage tracing technologies combine genome editing with single-cell sequencing to track cell divisions. We introduce Lineage Analysis via Maximum Likelihood (LAML) to infer a maximum likeliho...

The culmination of several PhD years — today LAML is published! LAML infers max likelihood time-resolved cell lineage trees from dynamic lineage tracing data accurately and efficiently. Thanks to @braphael.bsky.social for his guidance! genomebiology.biomedcentral.com/articles/10....

02.07.2025 12:37 — 👍 0 🔁 0 💬 0 📌 0

Gillian presenting her work on lineage analysis via Maximum Likelihood in poster form at CRA-WP

@cra-hq.bsky.social Pleased to have been at CRA-WP presenting work on LAML last week!

10.04.2025 18:43 — 👍 2 🔁 0 💬 0 📌 0

Learning Multiscale Genome and Cellular Organization | Computer Science Department at Princeton University

Looking forward to my seminar trip to Princeton Computer Science next week! www.cs.princeton.edu/events/26752

30.11.2024 02:26 — 👍 17 🔁 1 💬 2 📌 0

‘DNA Typewriters’ Can Record a Cell’s History Labs around the world are trying to turn cells into autobiographers, tracking their own development from embryos to adults.

Imagine a mouse in which all 10 billion cells keep a diary from fertilization. Imagine sentinel cells recording your experiences and sending out dispatches in the form of DNA. Here's a story I wrote about cell recorders 🧪 Gift link: nyti.ms/3Z3Mqza

25.11.2024 16:19 — 👍 109 🔁 33 💬 2 📌 9

I’d like to be added!

25.11.2024 16:03 — 👍 0 🔁 0 💬 0 📌 0

gillian is presenting her method for cell lineage tree inference on dynamic lineage tracing data at cold spring harbor laboratory at the 2024 Biological Data Science meeting

Pleased to have been at @cshlaboratory.bsky.social attending Biological Data Science 2024 these past few days presenting our work on LAML, to infer cell lineage trees from dynamic lineage tracing data. #cshl

16.11.2024 16:08 — 👍 1 🔁 0 💬 0 📌 0

@gillianychu is following 20 prominent accounts

Dr Gareth Hawkes
@drghawkes

MRC Career Development Fellow, Lecturer in Health Data Science, University of Exeter. Academic in genetics, rare variants and complex traits

Kris Sankaran
@sankaranlab

Assistant Professor of Statistics @uwmadison.bsky.social and @widofficial.bsky.social fellow. Developing algorithms and software for analyzing microbiome data. https://measurement-and-microbes.org/

Rafael Irizarry
@rafalab

Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.

Ji-Eun Park
@jieunpark

Research Fellow at DS in DFCI/Harvard PhD in Bios @ UNC Chapel Hill Things I love: statistical genetics, cancer genomics🧬, coffee☕️ and all sorts of 🥖🥐

@emmagrd

Mara Ulloa
@mara-ulloa

🙋🏻‍♀️| NSF GRFP Fellow & PhD Candidate 👩🏻‍💻| HCI, health, & ML + design research 🛜| www.MaraUlloa.com 💭| Advised by Maia Jacobs 📍l Northwestern, Computer Science

Lior Pachter
@lpachter

Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter

Eden Shaveet, MS
@edenshaveet

Ph.D. student, Cornell Tech, PAC Lab | Alum, Columbia, CS; Tufts School of Medicine, Health Informatics | NSF Fellow | Mentor, FIRST Robotics https://www.edenshaveet.com/

Phillip Compeau
@phillipcompeau

I came over here to shitpost. Computational biology (teaching) professor "Oh you're the guy who co-founded Rosalind" -- a few people, not many

Cong Ma
@congma

Assistant Professor, Gilbert S. Omenn Department of Computational Medicine & Bioinformatics, University of Michigan

Computing Research Association (CRA)
@cra-hq

Molly Schumer
@mollyschumer

Genetics & Evolution, Faculty at Stanford & Freeman Hrabowski Scholar at HHMI schumerlab.com

@mdmolinelli

Terence Tao
@teorth

Mathematician at UCLA. My primary social media account is https://mathstodon.xyz/@tao . I also have a blog at https://terrytao.wordpress.com/ and a home page at https://www.math.ucla.edu/~tao/

@nobelprize

Bogdan Pasaniuc
@bpasaniuc

Computational and statistical genetics. Excited about all things science. Professor of genetics at UPenn. Views my own. https://www.med.upenn.edu/bogdan-group/

Yuzhe Yang
@yuzheyang

Asst Prof @UCLA | RS @Google | PhD @MIT | BS @PKU #ML, #AI, #health, #medicine https://www.cs.ucla.edu/~yuzhe

Su-In Lee
@suinlee

Boeing Endowed Professor in the Allen School of Computer Science & Engineering at the University of Washington. Interested in AI/ML, computational biology, and AI in medicine. https://suinlee.cs.washington.edu/

Yuri Pritykin
@yuripritykin

Assistant Professor at Princeton University Lewis-Sigler Institute for Integrative Genomics (http://lsi.princeton.edu) and Department of Computer Science (https://www.cs.princeton.edu/). Lab website: https://pritykinlab.github.io/

Carl Zimmer
@carlzimmer.com

NYT columnist. Signal: carlzimmer.51 Newsletter: https://buttondown.com/carlzimmer/ Web: http://carlzimmer.com [This account includes a tweet archive]