Kris Sankaran's Avatar

Kris Sankaran

@sankaranlab.bsky.social

Assistant Professor of Statistics @uwmadison.bsky.social and @widofficial.bsky.social fellow. Developing algorithms and software for analyzing microbiome data. https://measurement-and-microbes.org/

29 Followers  |  31 Following  |  3 Posts  |  Joined: 12.02.2025  |  1.5771

Latest posts by sankaranlab.bsky.social on Bluesky

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Estimating the size of a set using cascading exclusion Let $S$ be a finite set, and $X_1,\ldots,X_n$ an i.i.d. uniform sample from $S$. To estimate the size $|S|$, without further structure, one can wait for repeats and use the birthday problem. This requ...

New paper with Sourav Chatterjee and Persi Diaconis: Estimating the size of a set with cascading exclusion, see arxiv.org/abs/2508.05901 and a whole github repo of examples in R spholmes.github.io/SetSize/, thank you #rstats and #quarto.

11.09.2025 13:56 — 👍 10    🔁 1    💬 0    📌 0

About a year ago, we cohosted a veridical data science event. This year, QB3-Berkeley is sponsoring Veridical Data Science for Biology, organized by graduate students and postdocs from the Center for Computational Biology at UC Berkeley. 🎟️ Check it out!

16.06.2025 15:44 — 👍 2    🔁 2    💬 0    📌 0
An example solution to the [Taxi Trips] exercise.

An example solution to the [Taxi Trips] exercise.

Here is a repository with the exercises I use in my data visualization class. We cover ggplot2/shiny and then consider different types of data (network, text, ...) and models (clustering, ...). I've tried to make the problems somewhat realistic. Feel free to reuse! github.com/krisrs1128/d...

20.05.2025 02:37 — 👍 6    🔁 1    💬 0    📌 0
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@guggfellows.bsky.social I’m deeply honored to be named a 2025 Guggenheim Fellow—especially as part of the Foundation’s historic 100th class. Grateful to be in the company of so many brilliant artists, scholars, and scientists. #guggfellows2025

15.04.2025 14:15 — 👍 9    🔁 2    💬 0    📌 0
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GitHub - lasy/alto: 'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and provides visualization functions to explore the... 'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and provides visualization functions to explore the alignmen...

I enjoyed the chance to (virtually) visit the department! I appreciate all the great questions -- I'd never considered the connections to supervised LDA and neuroimaging. And if anyone wants to try out the package, it's available here: github.com/lasy/alto/

01.03.2025 18:29 — 👍 1    🔁 0    💬 0    📌 1

Simulating microbiome data has been on my mind since the PhD, and writing this together with Saritha, @mixomics.org and @jsb-ucla.bsky.social has been amazingly clarifying. Thank you also to participants of the @mig-unimelb.bsky.social workshops for all the valuable discussions! #rstats #microbiome

18.02.2025 04:24 — 👍 4    🔁 0    💬 0    📌 0

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