Next generation of 1001 Genomes Plus browser and data download
Please indicate all features you would like to see in a browser that displays features of completely sequenced Arabidopsis thaliana genomes
We (Nordborg & Weigel labs) need input on the next generation of genome browsers & data download modes for the #Arabidopsis #1001GenomesPlus project. We have now a curated collection of over 500 long read genomes.
Please help us by filling out this questionnaire: docs.google.com/forms/d/e/1F...
24.11.2025 14:49 β π 58 π 64 π¬ 1 π 1
A staggering statistic: "North American researchers were charged over US$2.27 billion by just two for-profit publishers. The Canadian research councils and the US National Science Foundation were allocated US$9.3 billion in that year." What are we doing?
12.11.2025 13:58 β π 107 π 58 π¬ 3 π 7
Congratulations to Joe Felsenstein on being awarded the 2026 Mendel Medal!
14.11.2025 12:41 β π 101 π 33 π¬ 0 π 2
U.S. Congress considers sweeping ban on Chinese collaborations
Researchers speak out against proposal that would bar funding for U.S. scientists working with Chinese partners or training Chinese students
βThe prohibited activities would include joint research, co-authorship on papers, and advising a foreign graduate student or postdoctoral fellow. The language is retroactive, meaning any interactions during the previous 5 years could make a scientist ineligible for future federal funding.β
14.11.2025 01:03 β π 593 π 315 π¬ 59 π 278
Now that Im finally here, I'm excited to announce that I've joined @salkinstitute.bsky.social as a postdoc with @lmueller.bsky.social Keep your eyes open for everything AMF symbiosis, peptide biogenesis, and the apoplast!
06.11.2025 21:02 β π 19 π 5 π¬ 3 π 0
My lab at Indiana University is searching for a *postdoc* and *technician* to contribute to our work studying the evolution of social behavior using fruit flies as a model system. Details below, feel free to email me with any questions! More info on our research: saltzlab.com
05.11.2025 16:56 β π 50 π 79 π¬ 3 π 2
Our current carbon economy relies on fossil fuels, from which we isolate small organic molecules to produce medicines, plastics, cosmetic, or other chemicals that we use everyday. However, sustainability requires a more biomass-based carbon economy, where we engineer plants to produce precursor molecules, which can then be assembled to desired chemicals that we use daily. Plants have evolved an amazing diversity of metabolites, but these metabolites are not produced in every cell of the plant. Therefore, it is essential to understand how plants can express different metabolic pathways across different organs, tissues, and even cell types. We are interested in the following questions: How are metabolic pathways (especially specialized metabolism) controlled by cell fate? How can we reprogram plant cell fates for biomanufacturing? How can we toggle between differentiated cell states for metabolic engineering and totipotent cell state for genetic engineering?
It's grad school application season! My lab (cxli233.github.io/cxLi_lab/ ) will be recruiting a PhD student via the MPS program at MSU (mps.natsci.msu.edu) for Fall 2026.
Happy to take inquires via email (which can be found in the lab website) if you are applying this cycle.
06.10.2025 22:42 β π 15 π 15 π¬ 0 π 0
π’Announcement!
The call for πππ π
ππ₯π₯π¨π°π¬π‘π’π© π¬ππ‘ππ¦π ππ¨π« ππππ is now open! π
It is designed to offer support and mentorship to researchers transitioning from post-doctoral scientists to principal investigators
Info: πhttp://onlinelibrary.wiley.com/page/journal/1365313x/homepage/TPJ-fellowships
& in π§΅
29.09.2025 16:14 β π 19 π 16 π¬ 1 π 6
Petition to NSF to Restore Eligibility for the 2026 Graduate Research Fellowship Program Competition
π§ͺ Were you one of the many thousands of STEM students (and mentors) impacted by the sudden change in #NSF #GRFP eligibility last week?
We created a petition to NSF leadership and Congress to reverse the changes - please sign and share your stories here!!
laurenkuehne.github.io/grfpChanges/
29.09.2025 17:02 β π 17 π 12 π¬ 0 π 15
Happy to support this letter. My grad's situation here: bsky.app/profile/did:...
26.09.2025 17:19 β π 7 π 0 π¬ 0 π 0
The GRFP announcement from NSF cuts out an entire cohort of 2nd year students from consideration, without warning. This is so deeply unfair that it warrants a formal protest from the scientific community. If someone wants to work with me to craft an open letter and solicit signatures, LMK.
26.09.2025 17:10 β π 171 π 88 π¬ 9 π 9
Very frustrated with NSF GRFP. A 2nd year grad now ineligible after postponing last year.
Her pre-grad app was rejected without review for mentioning crop impacts.
I'm a previous recipient and served many years as a reviewer. The fellowship needs serious reform, not half-baked solicitation changes
26.09.2025 17:14 β π 21 π 1 π¬ 3 π 1
I hate this for the second years who had already been working on applications.
Also the USDA fellowship RFA has still not been issued for this year.
It is harder and harder to find fellowships to support the newest generation of scientists. π§ͺ
We are shortchanging our future.
26.09.2025 16:39 β π 18 π 9 π¬ 4 π 1
Assistant Professor of Plant Pathology
University of California, Davis is hiring. Apply now!
My department at UC Davis is hiring a mycologist, broadly interpreted. Please repost, share, and consider applying. recruit.ucdavis.edu/JPF07339
22.09.2025 17:38 β π 72 π 91 π¬ 2 π 0
Career Opportunities: DBMV: Tenure Track Assistant Professor towards Associate Professor in the field of Plant-organism (22484)
This looks like a great opportunity: #Tenure-track assistant #professor position at University of Lausanne on #MPMI
career5.successfactors.eu/career?caree...
17.09.2025 13:01 β π 23 π 22 π¬ 1 π 0
Flyer with a green leafy background announcing the Graduate Research Fellowship Program (GRFP) Workshop for Plant Researchers. Large bold text at the top reads: βWe need your help!β The flyer asks graduate students who have received a GRFP award, as well as postdocs, research scientists, and faculty PIs, to sign up as mentors for the Botanical Society of Americaβs GRFP Workshop.
Section titled What does mentoring require? lists two points:
Read statements from 4β6 students applying for the GRFP.
Provide feedback and facilitate two 1.5-hour meetings for your group.
On the right, a QR code and link direct potential mentors to register. Logos at the bottom include NSF GRFP and the Botanical Society of America.
Mentors needed for BSAβs GRFP Workshop! π±
The Graduate Research Fellowship Program (GRFP) Workshop for Plant Researchers is returning in 2025. With NSFβs 2026 GRFP deadline set for Oct 27, weβre looking for mentors to guide student applicants.
Learn how you can help!
mailchi.mp/botany.org/b...
12.09.2025 19:30 β π 11 π 16 π¬ 1 π 1
NSF Graduate Research Fellowship Program (GRFP)
While full solicitation isnβt up, looks like we have 2025 proposal deadlines for the GRFP: www.nsf.gov/funding/oppo...
08.09.2025 18:10 β π 49 π 42 π¬ 4 π 2
We hope the work is interesting to those trying to translate PAMP responses to pest and pathogen resistance!
05.09.2025 03:29 β π 1 π 0 π¬ 0 π 0
This study inspired lots moreβfor us
What is a sufficient level of PRR expression? Analyses of NLR expression from Krasileva lab (ref 52) were interesting here
How does early "PTI response" translate to resistance? Great review from Balint-Kurti lab (ref 43) helped us interpret our findings
05.09.2025 03:29 β π 1 π 0 π¬ 1 π 0
What about the caterpillars? We generated low expression (inr-2 allele) near-isogenic lines, but interestingly, In11 pretreatment still protected these plants from attack.
We conclude that insensitivity with common lab assays for PTI does not necessary correspond with resistance.
05.09.2025 03:29 β π 2 π 0 π¬ 1 π 0
Promoter alleles from different In11-reponsive or non-responsive varieties corresponded with strength driving luciferase expression in transient expression assays. Thus, low INR expression seems to mediate insensitivity to In11 in lab conditions.
05.09.2025 03:29 β π 1 π 0 π¬ 1 π 0
We found just a few insensitive accessions among hundreds of tested USDA-GRIN varieties. One variety was associated with lower expression of the INR gene. The low expression INR haplotype turned out to be locally prevalent in varieties from Jujuy province in Argentina.
05.09.2025 03:29 β π 1 π 0 π¬ 1 π 0
Evolutionary gain and loss of a plant pattern-recognition receptor for HAMP recognition
A plant immune receptor evolved recognition of caterpillar peptides through key molecular changes.
Legumes in the subtribe Phaseolinae evolved the INR immune receptor to detect attack by caterpillars through In11 peptide in their spit.
INR is strikingly conserved in legumes. 364 tested varieties of cowpea from our original 2020 GWAS are sensitive to In11!
elifesciences.org/articles/81050
05.09.2025 03:29 β π 1 π 0 π¬ 1 π 0
More fruits of studying natural variation in common bean (Phaseolus vulgaris): an interesting genetic basis for insensitivity to caterpillars' In11 elicitor π
Our new bioRxiv preprint from star technicians Brian Behnken and Wesley George below π§΅
www.biorxiv.org/content/10.1...
05.09.2025 03:29 β π 16 π 6 π¬ 2 π 0
Fantastic! Congrats Bruno!
04.09.2025 20:22 β π 2 π 0 π¬ 1 π 0
Spread the word π
Our department has an open position at the Assitant Professor level π±
03.09.2025 00:23 β π 26 π 29 π¬ 0 π 2
archaea, methane, microbial ecophysiology, single cell activity, next generation physiology / for evidence-based decision-making / I hold strong opinions / I donβt mince words / posts reflect personal views / www.environmental-microbiology.com
Computational biologist at Fred Hutchinson Cancer Center (See my work here: https://dcjones.github.io/). I also post about baking, books, and Seattle politics.
Co-founder and Co-Executive Director of Indivisible
This account surrounds hate and forces it to surrender
Cell Biologist | Assistant Professor | Quantitative Microscopy, Host-Microbe Interactions | Thoms Lab, Florida State University
Small farmer, ex-farm worker, crop scientist. Here to talk food, farms, & money.
patreon.com/farmtotaber
Postdoc in Fankhauser lab, University of Lausanne. Previously PhD in Leyser & Locke labs at Sainsbury Laboratory, Cambridge.
Development, plants, shoot branching, auxin, evo/devo, systems biology, food security
Towards diversity and equity in brain sciences | Become a member: http://alba.network | a division of FENS | Founding Partners @fens.org @ibroorg.bsky.social @sfn.org
Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Associate Professor Tufts University
Ecology/evolution of microbes in food systems. Constant gardener.
Alumnus@Schaller Lab at Uni-Hohenheim; π
Systeminπ;Plant immunity; Phosphoproteomics; R coding; She/her; πΆπ±lover adopt a π¦;incoming postdoc @slcuplants.bsky.social
Assistant Curator of Entomology @nhm.org | insects, genomes, museums | @cornelluniversity.bsky.social & New College of Florida alumna | she/her.
Assistant Professor, Univ of Pennsylvania. Plant developmental biology, robustness, evolution, transcription factors, Bajan rum
Fungal evolutionary ecology, genomics, bioinformatics, sci-art, code, data viz. She/her. Asst. Prof. at UC Berkeley.
USDA NIFA Postdoctoral Fellow @UMass
Plant Genome Evolution | Grasses
Clinical Psych PhD candidate at Emory
Founder and CEO of @standupforscience.bsky.social
Standupforscience.net
"Colette is wearing brass knuckles...w/ spikes tipped in poison"
βDelusional broadβ
"Lady Switchblade"
βDitsy socialist liberalβ
Mobilizing the fight for science and democracy, because Science is for everyone π§ͺπ
The hub for science activism!
Learn more β¬οΈ
http://linktr.ee/standupforscience
@ksvesq.bsky.socialβs husband; father of daughters; professor @georgetownlaw.bsky.social; #SCOTUS nerd @CNN.com
Bio: www.law.georgetown.edu/faculty/stephen-i-vladeck
"One First" Supreme Court newsletter: stevevladeck.com
Book: tinyurl.com/shadowdocketpb
Prof. @UC Davis βstructural biologistβοΈ ubiquitin system aficionado βΎ signaling & sensing mechanisms in plantsπ±in vivo interacomes πΈdad of 2
https://shabek-lab.ucdavis.edu/
A scientist, mostly
Naarm/Melbourne, AU & TΓΌbingen, DE
Plant biologist interested in stress recovery mechanisms. Postdoc @Ecker-lab @Salk and NIH/NIGMS K99 fellow. #DroughtStress #StressRecovery #PlantScience