Karel "CaCO3" Berka's Avatar

Karel "CaCO3" Berka

@krapnik.bsky.social

theoretical physical chemist, molecular modeller and chem- and bioinformatician - #AlphaFoldology enthusiast Palacky University Olomouc, ORCID:0000-0001-9472-2589 #boardgamegeek (tweets my own) #ELIXIRCZ

1,948 Followers  |  4,727 Following  |  553 Posts  |  Joined: 24.10.2023  |  1.9351

Latest posts by krapnik.bsky.social on Bluesky

is there a way how to import my MyHeritage pedigree into it?

02.02.2026 13:44 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

ze o nem bude osklive mluvit a nenecha ho jezdit do NATO nejde asi klasifikovat jako neco, co vstoupi do ucebnic politologie.

Obcas ty populisty berte v jejich vyjadreni vazneโ€ฆ myslim, ze v mnoha krajinach kolem nas se ukazuje, ze co rikaji, vazne po nastupu k moci delaji.

28.01.2026 07:30 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

tezkou ujmu tam slibuje, ne?

27.01.2026 23:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Registration for 9th Advanced in silico Drug Design workshop/challenge 2026 Note: Each workshop participant needs to complete the registration form in order to ensure compliance with the GDPR.

online registration is still online - forms.gle/knwjek2vdzpZ...

26.01.2026 12:33 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image Post image

We're hiring a ๐“๐ซ๐š๐ข๐ง๐ข๐ง๐  ๐’๐ฉ๐ž๐œ๐ข๐š๐ฅ๐ข๐ฌ๐ญ for ๐€๐ฅ๐ฉ๐ก๐š๐…๐จ๐ฅ๐ ๐ƒ๐š๐ญ๐š๐›๐š๐ฌ๐ž (AFDB)! Join our team to develop training content, create workshops, and drive global engagement with AlphaFold and AFDB.

Full-time, hybrid role.

Apply now! embl.wd103.myworkdayjobs.com/en-US/EMBL/d...

#AFDB #Jobs #emblebi

26.01.2026 10:55 โ€” ๐Ÿ‘ 6    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
9ADD - 9th Advanced Drug Design workshop 2026 - YouTube 9ADD workshop https://www.kfc.upol.cz/9add January 26, 2026 โ€“ January 30, 2026 Palacky University OlomoucThe 9ADD workshop focuses on using in silico tools a...

Our 9th Advanced in silico Drug Design workshop just started
- you can watch #9ADD at www.youtube.com/playlist?lis...

All materials will be available 9ADD workshop webpage> www.kfc.upol.cz/9add together with program

#compchemsky #chemsky #medchemsky ๐Ÿ’Š๐Ÿงฌ๐Ÿ–ฅ๏ธ

26.01.2026 12:24 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Post image

For this weekend only and only pushing on bluesky :)...get both chemscrapess book (PDF download) at 25% off when purchased together.

#chemchat #chemsky

23.01.2026 14:35 โ€” ๐Ÿ‘ 5    ๐Ÿ” 4    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
2026 International RSE Survey

If you develop software for research, consider responding to this survey trying to help understand who develops research software and how they work so as to get more robust support: softwaresaved.limequery.com/611257?lang=en #chemSky

23.01.2026 20:14 โ€” ๐Ÿ‘ 4    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

do you have a mutant one for comparison? ;)

25.01.2026 17:59 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

seems like the retraction did not change anythingโ€ฆ

24.01.2026 13:38 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
A line drawing of a street scene with children skipping, a bike going by and birds in the sky

A line drawing of a street scene with children skipping, a bike going by and birds in the sky

An observation test for your inner 8-year-old.
Youโ€™ll be doing well to spot 12 deliberate mistakes.

From Treasure magazine, 1963
Official answers coming soon

(Even if you donโ€™t reply, could you please โ€˜likeโ€™ or share this one?)

24.01.2026 08:16 โ€” ๐Ÿ‘ 1161    ๐Ÿ” 341    ๐Ÿ’ฌ 122    ๐Ÿ“Œ 49

ja mel spravne jen 8. Jste dobrรก

24.01.2026 09:15 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

kdo se vrati z Mordoru, aby to zase spravil?

19.01.2026 14:13 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

BSA protein concentration benchmark?

19.01.2026 14:10 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

my jsme si se zenou udelali Audit ferove domacnosti a dost vyrovnane to bylo

13.01.2026 20:00 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

dฤ›snรฝ, vรกลพnฤ›โ€ฆ

v jak velkรฉ uฤebnฤ› to mรกลก? ;)

09.01.2026 12:20 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Altmetric Explorer screenshot: Showing 5,011,088 mentions (from 4,918,333 individual posts) of research outputs from the results of your search query.

Altmetric Explorer screenshot: Showing 5,011,088 mentions (from 4,918,333 individual posts) of research outputs from the results of your search query.

Since Jan 1 2025, which feels like four trillion years ago, research has been shared on here 5 million whole-ass times. Bluesky recently passed 2 billion posts IN TOTAL.

So 0.25% of the entire site's traffic was citations to research.

That is actually massively high. Is it? Yes. Here's why.

08.01.2026 13:08 โ€” ๐Ÿ‘ 297    ๐Ÿ” 112    ๐Ÿ’ฌ 8    ๐Ÿ“Œ 13

so finally I ordered four Goodsell inspired puzzles.

07.01.2026 18:59 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

multiple puzzles mixed together with left some data out - trying to find out what is on the picturesโ€ฆ

07.01.2026 04:40 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

I am thinking about making several protein structure puzzle for computational proteomics course of @eubic-ms.org - which structures would you suggest and why?

06.01.2026 19:25 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

hustรฝ!

06.01.2026 19:20 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

BTW: Transition energy is 118.43 kcal/mol in vacuo with OMol25's eSEN Conserving Small model.

Not that much - those Christmas cookie eating should do the job... :)

#theochem #compchem #chemsky โš›๏ธ๐Ÿงช #RareEvent #EnhancedSampling #PathSampling #PhysChem #chemchat #Chemistry #ChemBio #EdTech

26.12.2025 22:09 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
Home - BEST-CSP | COST Action CA22107 BEST-CSP | COST Action CA22107. Bringing Experiment and Simulation Together in Crystal Structure Prediction.

We are taking up a challenge with the #BEST-CSP blind test of predictions of physical properties of #molecular_crystals. Let's see what we can achieve before May. best-csp.eu #COSTactions #CompChem #PhysChem

23.12.2025 09:42 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

did it?

26.12.2025 22:04 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Video thumbnail

Molecular PF 2026

26.12.2025 22:02 โ€” ๐Ÿ‘ 17    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

cool tuning of protein language models to individual families with ProteinTTT #Alphafoldology

24.10.2025 02:53 โ€” ๐Ÿ‘ 5    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
fake Nobel prize for Donald Trump

fake Nobel prize for Donald Trump

He did it!

10.10.2025 07:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

V-rescale should be almost as easy as Berendsen and it works fine

06.10.2025 18:29 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

so it would make nice tool for teaching of molecular modelling bsky.app/profile/krap...

06.10.2025 18:21 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Yes, please!

06.10.2025 18:20 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

@krapnik is following 20 prominent accounts