Stoked to finally have a preprint out for Phold, our tool that uses protein structural information to enhance phage genome annotation #phagesky 1/n
www.biorxiv.org/content/10.1...
@hannelorelongin.bsky.social
PhD student @ Computational Systems Biology & Lab of Gene Technology. Investigating PTMs in viruses and bacteria with bioinformatics π»π¦
Stoked to finally have a preprint out for Phold, our tool that uses protein structural information to enhance phage genome annotation #phagesky 1/n
www.biorxiv.org/content/10.1...
π¨Β New preprint π¨
My phage annotation tool, Phynteny, finally has a preprint and a brand new version powered by a cool AI transformer architecture and protein language models! #phagesky
www.biorxiv.org/content/10.1...
Curious about our findings and where we're headed? Happen to be at #ISMB2025 ? Come check out
my poster (A-229, function COSI) today!
π£ New preprint alert!
Happy to share the first results from our effort to reannotate Pseudomonas #phage proteins of unknown function, using structural bioinformatics.
π doi.org/10.1101/2025...
We've folded a lot of proteins! You can see some of them here @linsalrob.bsky.social @gbouras13.bsky.social
07.07.2025 08:49 β π 13 π 5 π¬ 0 π 0Hip hip hooray: our #PTM conservation tool FLAMS turns 1 π
To celebrate, we have added handy new features to FLAMS web, incl. 3D visualization of hit proteins & PTM sites with known active/binding sites.
Come check it out @ tinyurl.com/flamsweb & let us know what you think!
1/11 - With Karin Mitosch and ClΓ©ment Potel + colleagues in Savitski lab and @typaslab.bsky.social @embl.org, Iβm very happy to share our discovery of a hyper-promiscuous phage protein kinase (T7K) which broadly deactivates bacterial defenses! π¦
www.biorxiv.org/content/10.1...