 
                                                
    
    
    
    
            Well, it was a large one, so it was analyzed tile by tile π
               
            
            
                22.07.2025 13:56 β π 2    π 0    π¬ 0    π 0                      
            
         
            
        
            
            
            
            
            
    
    
    
    
            Check out our latest release of the napari-clusters-plotter plugin! It is so versatile now, try it out with your data! @jo-soltwedel.bsky.social did a great job refactoring a lot of the code to ease its maintainance! βοΈπ§
               
            
            
                03.07.2025 19:44 β π 3    π 2    π¬ 0    π 0                      
            
         
            
        
            
            
                            
            
            
            
    
    
    
    
            Some new additions for the upcoming @napari.org clusters-plotter version π0.9.0 around the corner! Powered by some work from @mazoc.bsky.social, it casually turns into a pretty neat tool for feature map creation π
github.com/BiAPoL/napar...
               
            
            
                12.04.2025 12:56 β π 10    π 4    π¬ 1    π 0                      
            
         
            
        
            
            
            
            
                                                 
                                                         
                                                
    
    
    
    
            Today we had two fantastic key note talks at #TiM2025. Matthew Hartley enlightened us about #DataSharing through @bioimagearchive.bsky.social
π¬β‘οΈπ§βπ¬
Mayeul Collot invited us into the world of photo-convertable dyes for #highresolutionimaging! π΄β‘οΈπ’
Many thanks to our amazing speakers!
               
            
            
                18.03.2025 20:37 β π 20    π 4    π¬ 0    π 0                      
            
         
            
        
            
            
            
            
                                                 
                                                
    
    
    
    
            2hrs into #TiM2025 and already mind=π€―. Rendering entire animals and human organoids in 3D and observing organism-wide disease distributions by @erturklab.bsky.social
               
            
            
                17.03.2025 14:00 β π 8    π 1    π¬ 0    π 0                      
            
         
            
        
            
            
            
            
                                                 
                                                
    
    
    
    
            Learning about image segmentation tools in napari/python with @jo-soltwedel.bsky.social & @zoca-biodev.bsky.social at the #TiM2025.
Excellent Workshops and great people here in MΓΌnsingen. ππ§βπ¬ #gerbi-gmb
               
            
            
                18.03.2025 16:09 β π 9    π 3    π¬ 0    π 0                      
            
         
            
        
            
            
            
            
            
    
    
            
                        
                Original post on fosstodon.org
                
            
        
    
    
            Hello naparistas!
In recent months, core dev @czaki has been hard at work to improve the performance of our Shapes layer. We've now released napari 0.5.6rc0 with the option to turn on C++ acceleration of Shapes layer startup time. If you use the Shapes layer please help us with testing! Check [β¦]
               
            
            
                20.01.2025 13:28 β π 5    π 1    π¬ 0    π 0                      
            
         
    
         
        
            
        
                            
                    
                    
                                    
                            
                    
                    
                                            We study the molecular and biophysical mechanisms underlying tissue morphogenesis @poldresden.bsky.social @tudresden.bsky.social @erc.europa.eu @embo.org
https://physics-of-life.tu-dresden.de/team/pol-groups/barriga
                                     
                            
                    
                    
                                            PhD Candidate at @cppape.bsky.social lab. 
                                     
                            
                    
                    
                                            Biophysicist tying to make sense of life.
Interdisciplinary @FWOVlaanderen PhD Fellow with @ColindaScheele at @vib_ccb.
                                     
                            
                    
                    
                                            The BioImage Analysis Unit designs innovative computational methods to address challenging biological questions through rigorous quantitative approaches @Icy_bioimaging.bsky.social
https://research.pasteur.fr/en/team/bioimage-analysis/
@InstitutPasteur
                                     
                            
                    
                    
                                            PhD Student with the Jesse Veenvliet Group at the @mpicbg.bsky.social . Interested in all things Data and 3D bioimage analysis, organoids and development!
                                     
                            
                    
                    
                                            #Duke #UCSD Alum; Recovering Academic; Research IT 
@jacksonlab.bsky.social; core dev @napari.fosstodon.org.ap.brid.gy
                                     
                            
                    
                    
                                            Scientific Project Manager at the German Cancer Research Center (DKFZ) in Heidelberg, project coordination for NFDI4BIOIMAGE and I3D:bio, biologist by training (immunology, biochemistry, cell biology)
                                     
                            
                    
                    
                                            Microscopist and image analyst in the making. Core facility staff at BIU @helsinkiuni and loving it.π¬π©π»βπ¬π©π»βπ»
                                     
                            
                    
                    
                                            BioImage Analyst
Head of BioImage Informatics, SciLifeLab
NBIS, Sweden
https://www.scilifelab.se/units/bioimage-informatics/
                                     
                            
                    
                    
                                    
                            
                    
                    
                                            Cross-posting from idlethumbs.social/@ratamero
half respectable professional (life sciences data stuff), half nerdy gremlin. views my own etc etc. he/him/ele
https://erickratamero.com
                                     
                            
                    
                    
                                            Scientist + Teacher UvA/Amsterdam | Cells | Molecules | Microscopy Quantitative imaging  | Fluorescent Proteins | Biosensors | Open Science | dataViz | R | web apps
Homepage: https://joachimgoedhart.github.io/
DataViz Apps: https://huygens.science.uva.nl
                                     
                            
                    
                    
                                            Mechanobiology  /  Multi-cellular assemblies
                                     
                            
                    
                    
                                            Bio-image Analyst, Computer scientist, and plenty of other things that end in Β«-istΒ» @pasteur.fr
                                     
                            
                    
                    
                                            Associate Prof at Abo Akademi University, Turku, Finland.
Cell biologist interested in microscopy and image analysis. My opinions are my own.
cellmig.org
                                     
                            
                    
                    
                                            PhD Student @LabOptBio. In love with education, sciences, and poetry. (Bioimage analysis) He/him
                                     
                            
                    
                    
                                            BioImage Analysis at Vinicna Microscopy Core Facility & assistant professor at UCT Prague focused on medical signal and image analysis. Spearheading the CzechBIAS.
                                     
                            
                    
                    
                                            Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ 
                                     
                            
                    
                    
                                            Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia