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Ruben Dries

@rndries.bsky.social

Spatial biology | Software engineering | Giotto Suite | Oncology Research | Cancer Disparities www.drieslab.com www.giottosuite.com

230 Followers  |  51 Following  |  2 Posts  |  Joined: 15.11.2024  |  1.4386

Latest posts by rndries.bsky.social on Bluesky


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#osteosarcoma #singlecell #spatialtranscriptomics #tumormicroenvironment #comparativeoncology #bioinformatics #cancerresearch | Yogesh Budhathoki πŸŽ‰ First-author preprint now available on bioRxiv! πŸŽ‰ I’m excited to share our latest work, presenting an integrative single-cell and spatial transcriptomic analysis of osteosarcoma, mapping cellular ec...

Sharing a new biorxiv paper that I helped out on. We compiled osteosarcoma #SingleCell RNAseq data from humans, canines, mouse and PDX models - both primary and mets. We found interesting tumor subpopulations. Should be a very useful resource to study OS!
🧬 πŸ–₯️
www.linkedin.com/posts/yogibu...

16.01.2026 21:09 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 2    πŸ“Œ 0
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Giotto Suite: a multiscale and technology-agnostic spatial multiomics analysis ecosystem - Nature Methods Giotto Suite provides a comprehensive, flexible and scalable platform for technology-agnostic spatial omics analysis using R.

Giotto Suite provides a comprehensive, flexible and scalable platform for technology-agnostic spatial omics analysis using R. @rndries.bsky.social

www.nature.com/articles/s41...

03.10.2025 12:44 β€” πŸ‘ 9    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Very proud to finally publish Giotto Suite after many years of hard work. It's a big milestone for our lab and will be a massive stepping stone for our ongoing projects and ideas. Take a look at giottosuite.com and feel free to share feedback and ideas for improvement.

02.10.2025 14:02 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 1
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KODAMA goes spatial.
doi.org/10.1101/2025...
#spatialtranscriptomics #visium #visiumhd #seurat #giotto

02.06.2025 20:22 β€” πŸ‘ 14    πŸ” 15    πŸ’¬ 0    πŸ“Œ 1
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Method of the Year 2024: spatial proteomics - Nature Methods Approaches for profiling the spatial proteome in tissues are the basis of atlas-scale projects that are delivering on their promise for understanding biological complexity in health and disease.

And the method of the year is .... Spatial Proteomics www.nature.com/articles/s41...

06.12.2024 20:31 β€” πŸ‘ 10    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Whole-brain spatial transcriptional analysis at cellular resolution

Incredible study - 3D single cell imaging of the entire mouse brain - also on the cover of this week's #Science
πŸ§ͺπŸ”¬πŸ€―

www.science.org/doi/10.1126/...

22.11.2024 16:16 β€” πŸ‘ 65    πŸ” 18    πŸ’¬ 0    πŸ“Œ 2

Starter a Spatial Tissue Profling/Omics/Biology Startup package. Will be updating often.
Please stop by again soon!
go.bsky.app/7a9Frz9

24.11.2024 14:53 β€” πŸ‘ 46    πŸ” 22    πŸ’¬ 19    πŸ“Œ 0

@rndries is following 20 prominent accounts