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Hasan Yardimci

@hyardimci.bsky.social

Group leader at the Francis Crick Institute. Studying DNA replication one molecule at a time.

776 Followers  |  370 Following  |  7 Posts  |  Joined: 13.11.2024  |  1.8446

Latest posts by hyardimci.bsky.social on Bluesky

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Peptidomimetic Inhibition of DONSON/GINS as an experimental tool and potential an@cancer strategy at University of Birmingham on FindAPhD.com PhD Project - Peptidomimetic Inhibition of DONSON/GINS as an experimental tool and potential an@cancer strategy at University of Birmingham, listed on FindAPhD.com

πŸ’‘ PhD student position at the University of Birmingham, UK. Fully funded by MRC AIM doctoral training programme. 4 years. Open to πŸ‡¬πŸ‡§ πŸ‡ͺπŸ‡Ί & 🌎. DNA replication 🧬 . Collaboration with Prof Andrew Wilson (Chemistry). Deadline midday (GMT) 9 January 2026. Please share πŸ˜€πŸ‘

www.findaphd.com/phds/project...

03.12.2025 19:23 β€” πŸ‘ 6    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Congratulations Hana!

02.12.2025 17:31 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Genome integrity relies on rapid recycling of DNA Pol III in bacteria | PNAS DNA replication requires precise coordination between DNA unwinding and DNA synthesis. In all domains of life, protein–protein interactions at the ...

Happy to share our most recent work www.pnas.org/doi/10.1073/.... Here we describe how efficient DNA replication in E. coli is dependent on an interaction between SSB-ssDNA and the DNA polymerase (Pol III). Thanks to all the co-authors for their hard work!

20.11.2025 16:54 β€” πŸ‘ 38    πŸ” 17    πŸ’¬ 2    πŸ“Œ 2
Rescuing the bacterial replisome at a nick requires recombinational repair and helicase reloading - Nature Communications DNA damage can lead to cell death. Here, the authors show that a simple cut on either strand of DNA can inactivate bacterial chromosome replication. Surprisingly, only a core set of recombination prot...

Cool work from Heath Murray's lab where they use Cas9 nickase to study how ssDNA breaks are repaired in Bacillus subtilis #MicroSky www.nature.com/articles/s41...

28.11.2025 14:25 β€” πŸ‘ 16    πŸ” 8    πŸ’¬ 0    πŸ“Œ 1
Postdoctoral Fellow - H Yardimci Lab

We are recruiting a postdoctoral fellow to study mechanisms of DNA replication stress using single-molecule imaging tools. If you are excited about microscopy, replisome dynamics, and genome stability, we’d love to hear from you.

Application deadline: 24 December

www.crick.ac.uk/careers-stud...

25.11.2025 11:55 β€” πŸ‘ 31    πŸ” 26    πŸ’¬ 0    πŸ“Œ 0

Last few days to apply for this PhD project in our lab. Mix of biochemistry and structural biology, DNA replication and ubiquitin signalling. Get in touch if interested. Full application through official university portal. Deadline on 27th of November!

22.11.2025 08:44 β€” πŸ‘ 7    πŸ” 10    πŸ’¬ 0    πŸ“Œ 0
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πŸ“’ Excited to share that our study has just been published in Nature Communications! We uncover how CRL4-DCAF12 regulates the cellular levels of MCMBP, a chaperone essential for assembling nascent MCM2-7 complexes, to ensure accurate and error-free genome duplication.

28.10.2025 15:04 β€” πŸ‘ 20    πŸ” 8    πŸ’¬ 4    πŸ“Œ 0
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Senior Research Technician at University of Birmingham Explore an exciting academic career as a Senior Research Technician. Don't miss out on other academic jobs. Click to apply and explore more opportunities.

We are looking for a senior technician (can undertake PhD) at Uni of Birmingham (UK) to study chromatin replication and ubiquitylation using Xenopus egg extract. Deadline 28/10/25. Get in touch with me or @m-saponaro.bsky.social for informal inquiries. Please share.
www.jobs.ac.uk/job/DOW912/s...

07.10.2025 08:51 β€” πŸ‘ 8    πŸ” 13    πŸ’¬ 0    πŸ“Œ 2

Are you interested in working on related projects? 🌱
The Knipscheer lab at the Hubrecht Institute (Utrecht, the Netherlands) has openings for a postdoc and a PhD position.
Apply here: www.hubrecht.eu/jobs

19.09.2025 12:32 β€” πŸ‘ 13    πŸ” 10    πŸ’¬ 1    πŸ“Œ 1
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It is not always safe to repair DNA Damage. Sometimes, cells "just bypass it".

During DNA replication, repair of lesions on DNA can be dangerous. Cells instead "tolerate" DNA damage and focus on finishing replication.

Read our review and find out why and how: doi.org/10.1016/j.ti...

22.08.2025 11:48 β€” πŸ‘ 55    πŸ” 26    πŸ’¬ 2    πŸ“Œ 0
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πŸ“’ For all HaloTag loversπŸ’™πŸ’šπŸ’›β€οΈπŸ’œπŸ©Ά we are excited to share that our work, in which we developed a new biotin-HaloTag ligand, is now published in @jcb.org! Full link here: rupress.org/jcb/article-...

23.07.2025 10:10 β€” πŸ‘ 64    πŸ” 24    πŸ’¬ 1    πŸ“Œ 0
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Yadav, Jadhav, @hanasedlackova.bsky.social et al present a novel cell-permeable biotin-HaloTag ligand. The reported ligand expands the HaloTag toolbox by enabling in vivo labeling & providing capabilities for efficient affinity capture of protein variants from live cells rupress.org/jcb/article/...

16.07.2025 16:15 β€” πŸ‘ 18    πŸ” 11    πŸ’¬ 1    πŸ“Œ 0

Thanks Gideon!

09.07.2025 20:44 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Β£2.3m awarded to study DNA replication stress Hasan Yardimci, Senior Group Leader at the Francis Crick Institute, has received a Wellcome Discovery Award for Β£2.3m to study how cells faithfully duplicate their genetic material when under stress.

Congratulations to @hyardimci.bsky.social on receiving a Β£2.3m @wellcometrust.bsky.social Discovery Award to study how cells faithfully duplicate their genetic material when under stress. πŸ₯³

www.crick.ac.uk/news-and-fea...

09.07.2025 13:40 β€” πŸ‘ 41    πŸ” 5    πŸ’¬ 1    πŸ“Œ 0
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RNA transcripts regulate G-quadruplex landscapes through G-loop formation G-quadruplexes (G4s) are prevalent DNA structures that regulate transcription but also threaten genome stability. How G4 dynamics are controlled remains poorly understood. Here, we report that RNA tra...

Excited our paper is out! G-quadruplex (G4) unwinding via an intricate G-loop assembly and disassembly mechanism maintains genome integrity. Pioneered by Koichi Sato with great collaborators Jing Lyu and @simonelsasser.bsky.social Check it out: www.science.org/doi/10.1126/science.adr0493 🧡(1/4)

13.06.2025 09:33 β€” πŸ‘ 77    πŸ” 22    πŸ’¬ 6    πŸ“Œ 3
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New from our lab @crick.ac.uk, in collaboration with the Enchev and Bukau labs.
By studying a protein that is difficult to fold, we discover fascinating new mechanisms by which the ribosome supports protein biogenesis.
www.biorxiv.org/content/10.1...

02.06.2025 16:12 β€” πŸ‘ 65    πŸ” 20    πŸ’¬ 2    πŸ“Œ 2
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Postdoctoral Research Associate in the Blackford Group A position as Postdoctoral Research Associate is available at the Department of Cellular and Molecular Medicine, in the group headed by Dr. Andrew Blackford. Th

We’re #hiring, please share! A fully funded #postdoc position is available in my lab to work on DNA damage response mechanisms.

Please get in touch with your CV if you are interested; closing date: 27th June 2025.

More details here: candidate.hr-manager.net/ApplicationI...

29.05.2025 11:26 β€” πŸ‘ 23    πŸ” 35    πŸ’¬ 0    πŸ“Œ 0
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Single-molecule analysis reveals the mechanism of chromatin ubiquitylation by variant PRC1 complexes Single-molecule experiments show that active conformation formation controls chromatin ubiquitylation kinetics by variant PRC1.

Our new study of chromatin ubiquitylation by variant PRC1 on the single-molecule scale: We visualize directly how vPRC1 ubiquitylates neighboring nucleosomes during a single binding event, showing a potential mechanism how H2Aub domains are established.
www.science.org/doi/10.1126/...

21.05.2025 18:59 β€” πŸ‘ 74    πŸ” 29    πŸ’¬ 2    πŸ“Œ 0

Application deadline is this Friday!

12.05.2025 14:35 β€” πŸ‘ 2    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
UK DNA Replication Meeting 2026 Research in the DNA replication field is progressing at a remarkable rate. Technological innovations in biochemical reconstitution, structural biology, proteomics and DNA sequencing are helping to rap...

3rd edition of the fantastic UK DNA replication meeting is happening next September in Edinburgh. Don't miss out 🧬🏴󠁧󠁒󠁳󠁣󠁴󠁿

www.biochemistry.org/events-and-t...

15.04.2025 10:30 β€” πŸ‘ 22    πŸ” 16    πŸ’¬ 0    πŸ“Œ 0
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πŸ“’ For all DNA fiber enthusiasts! πŸŸ₯🟩 We are thrilled to announce the release of our long-awaited AI-based workflow for the automated and quantitative analysis of DNA fibers. It's an exciting step forwardβ€”check it out on bioRxiv! lnkd.in/dQWUPtsP

30.03.2025 09:54 β€” πŸ‘ 29    πŸ” 21    πŸ’¬ 6    πŸ“Œ 0
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Science under siege: protecting scientific progress in turbulent times As Editors-in-Chief of The Company of Biologists' journals, we have been watching with growing concern the policy changes in the United States of America (USA) and the challenges that these are creati...

Science under siege: protecting scientific progress in turbulent times

journals.biologists.com/dev/article/...

13.03.2025 13:06 β€” πŸ‘ 79    πŸ” 44    πŸ’¬ 2    πŸ“Œ 2
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Resolution of collapsed forks is separate from completion of DNA synthesis Replication fork collapse at single-strand DNA breaks (SSBs) poses a serious threat to genome stability. Using Xenopus egg extracts, we show that a replication fork encountering an SSB on either the l...

πŸ§¬β›“οΈβ€ Our latest preprint examines the fate of collapsed forks in vertebrates 🐸 and our colleagues in @heathmurraylab.bsky.social asked similar questions in bacteria 🦠 to reveal how evolution shapes the response to fork collapse (see🧡)
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...

10.03.2025 23:18 β€” πŸ‘ 8    πŸ” 5    πŸ’¬ 1    πŸ“Œ 1
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G-quadruplex–stalled eukaryotic replisome structure reveals helical inchworm DNA translocation DNA G-quadruplexes (G4s) are non–B-form DNA secondary structures that threaten genome stability by impeding DNA replication. To elucidate how G4s induce replication fork arrest, we characterized fork ...

How do replisomes walk on DNA? And what happens when they run into a G-quadruplex? @sahilbatra.bsky.social and @benallwein.bsky.social provide unexpected insight in our latest paper with Richard Hite @mskcancercenter.bsky.social @science.org www.science.org/doi/10.1126/.... Congrats to all authors!

06.03.2025 21:30 β€” πŸ‘ 107    πŸ” 48    πŸ’¬ 8    πŸ“Œ 2
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In our latest preprint, we uncover how CMG helicase overcomes covalent DNA-protein crosslinks. Check out our findings here:
www.biorxiv.org/content/10.1...

07.03.2025 12:05 β€” πŸ‘ 22    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
Yardimci Lab | Single-molecule visualisation of the eukaryotic replication machinery

A new PhD position is available in my lab to explore DNA replication mechanisms using single-molecule approaches. Apply by 19th of March:

www.crick.ac.uk/careers-stud...

04.03.2025 11:39 β€” πŸ‘ 9    πŸ” 14    πŸ’¬ 0    πŸ“Œ 0
DNA replication and genome maintenance: from basic biology to disease

SAVE THE DATE! The next EMBO | EMBL Symposium on 'DNA replication and genome maintenance: from basic biology to disease' will be held October 20-23, 2026.
Β 
Organized by Helle Ulrich (IMB), Johannes Walter (Harvard) and Anja Groth (Danish Cancer Institute).

www.embl.org/about/info/c...

26.02.2025 15:22 β€” πŸ‘ 79    πŸ” 58    πŸ’¬ 1    πŸ“Œ 1
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Predictomes, a classifier-curated database of AlphaFold-modeled protein-protein interactions Schmid and Walter train a classifier that discerns functionally relevant structure predictions in proteome-wide protein-protein interaction (PPI) screens using AlphaFold-Multimer, and they use this co...

Very excited to share that my thesis work is out in Molecular Cell! We trained a Structure and Omics informed Classifier (SPOC) to score binary AlphaFold multimer (AF-M) predictions by structural quality and consistency with experimental omics datasets. www.cell.com/molecular-ce...

26.02.2025 18:14 β€” πŸ‘ 28    πŸ” 11    πŸ’¬ 3    πŸ“Œ 1
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PhD student recruitment 2025 PhD recruitment is now open!

Our spring round of PhD recruitment is now open!

We’re looking for researchers of any nationality with backgrounds in biological or biomedical sciences, physics, chemistry, maths or computer science.

Find out more and apply by midday, 19 March:

www.crick.ac.uk/careers-stud...

20.02.2025 16:48 β€” πŸ‘ 19    πŸ” 20    πŸ’¬ 0    πŸ“Œ 2
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4-year PhD studentship available in my lab to study helper helicase function in eukaryotic DNA replication. Happy to receive any enquiries directly to me. Come join us and add your figure to the lab lego collection!

institute-genetics-cancer.ed.ac.uk/igc-graduate...

07.02.2025 11:42 β€” πŸ‘ 21    πŸ” 17    πŸ’¬ 0    πŸ“Œ 1

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