Christian Brueffer

📣📣 Cool job alert! The @bakerresearchau.bsky.social is recruiting up to 2 new PIs in Biomedical Data Science 👉 www.seek.com.au/job/85989791...

You’d join an awesome institute in an incredible city (Melbourne, Australia) as well as partnerships like with @cam.ac.uk… you’ll also get to work with me 😁

Tenure-Track Assistant Professor / Associate Professor in Bioinformatics at Aarhus University, Denmark - Vacancy at Aarhus University Vacancy at Department of Molecular Biology and Genetics - BiRC - Bioinformatics Research Center, Aarhus University

📣 🥳 🧑‍💻 Our department is hiring:

Tenure-Track Assistant Professor / Associate Professor in Bioinformatics at Aarhus University, Denmark

Deadline June 1st

Thanks for sharing!

mbg.au.dk/en/news-and-...

Minimap2-2.29 released with the support of short RNA-seq read alignment. More explanation and results here: lh3.github.io/2025/04/18/s...

GitHub - ACEnglish/truvari: Structural variant toolkit for VCFs Structural variant toolkit for VCFs. Contribute to ACEnglish/truvari development by creating an account on GitHub.

🚀 Truvari v5.0 is here! 🎉
What’s new?
🔹 Enhanced symbolic variant support for <DEL>, <DUP>, <INV>
🔹 Robust BND comparison for cross-representation SV matching
🔹 Improved SV sequence similarity & HUGE SV support
🔹 Cleaner UI & Revamped API

👉 More: github.com/ACEnglish/tr...
#Genomics #Bioinformatics

#ICYMI our deep dive into ALK1 biology, at the intersection between angiogenesis and immunology with clear implication for the targeting of immunomodulatory cues & cancer therapy!

BRCA1 turned 30 🎉
To celebrate, Jos Jonkers and I explored three decades of BRCA1 research - what we’ve learned about its biology, its role in tumorigenesis and future directions to improve the life of BRCA1 mutation carriers.
Now out in Cancer Discovery ⬇️: aacrjournals.org/cancerdiscov...

Our first curated draft somatic structural variant benchmark for the new GIAB PDAC tumor cell line HG008-T is at ftp-trace.ncbi.nlm.nih.gov/ReferenceSam..., based on extensive short+long read sequencing data described in doi.org/10.1101/2024.... Feedback to improve future versions is very welcome!

Regular abstracts from #SABCS24 are out!

3407 pages of new breast cancer discoveries.

Find them here: sabcs.org/Portals/0/Do...

Added!

two women are standing next to each other and one of them is saying i 'm so glad that you are here ALT: two women are standing next to each other and one of them is saying i 'm so glad that you are here

WOOT!
Just in time for #SABCS24 looks like @sabcs.bsky.social is officially on BlueSky!
cc: @maryamlustberg.bsky.social @drsgraff.bsky.social @stage4kelly.bsky.social @amjohnston.bsky.social @amybeumer.bsky.social @raalbany.bsky.social @hoperugo.bsky.social

Added!

Done!

Done! Sorry for the delay, notifications have been mad the last couple of days, so this one slipped through.

Done and welcome!

I dont care for either but my sambo has needs ;-)

Vegemite too by any chance?

Happy to join the bioinformatics + genomics starter. Thanks for the work!

Done!

Dear Colleagues,
For all of you in BlueSky, Greetings, We are Now Here!!
We invite you to Join & Follow OncoAlert at @oncoalert.bsky.social
Thank you for your support!

For the #cancer / #oncology folks, OncoAlert is now on bsky: @oncoalert.bsky.social

single-cell computational methods Join the conversation

in case this is useful to someone in this massive platform migration: a starting pack for single-cell omics computational methods
go.bsky.app/GmS1cH

Inspired by the other amazing starter packs - here's one for cancer researchers!

I tried to make this broad - from immunology to genomics to cell biology and so much more..

This list also includes organizations & institutes supporting cancer researchers 🧪🔬⚕️🩺

Hope its useful!

go.bsky.app/FEoaJMc

Thanks Johanna, could you add me as well? @laosaal.bsky.social would be another good addition.

I've created a Breast Cancer Starter Pack covering clinical oncology and research. Please share, and let me know in case you'd like to be added. #brca #breastcancer

go.bsky.app/6KXpPSy

We are actively recruiting for two open Computational Biology positions in our NGS group - both covered by this listing

www.ginkgobioworks.com/job-listings...

Happy to have contributed a small part to this study. "Ultrahigh" #HER2 copy number by #dPCR or #RNAseq signals poor response to adjuvant #trastuzumab in breast cancer.

Hackathon - Improving the annotation of Galaxy resources for microbial This hackathon aims to improve the annotation of Galaxy resources for microbial data analysis and beyond

Online Hackathon to improve the annotation of @galaxyproject.bsky.social resources for microbial data analysis (and beyond): galaxyproject.org/events/2024-...
📆 Date: March 11th - 15th
📍 Location: Online via Zoom & chat. 2 daily stand-ups
👥 Participation: Free. Open to anyone, anywhere

Still a week to apply for this postdoc position to work with us on deep learning models for regulatory genomics 👇🏼

We will have a job ad for Japanese ecologists coming soon - any tips on breaking into the Japanese cluster here (i know its pretty big)? Good feeds or anything I can pop up in? (Other than, obviously, posting in Japanese).

Interested in breaking all your bioinformatic pipelines? Look no farther:

https://gatk.broadinstitute.org/hc/en-us/articles/6012243429531-GenotypeGVCFs-and-the-death-of-the-dot