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Mike Honey

@mikehoney.bsky.social

Data Visualisation and Data Integration specialist - Melbourne, Australia https://linktr.ee/mike_honey_ Support my projects by sponsoring me on Github: https://github.com/sponsors/Mike-Honey

10,365 Followers  |  100 Following  |  3,505 Posts  |  Joined: 19.08.2023  |  2.0129

Latest posts by mikehoney.bsky.social on Bluesky

“harming memory and causing anxiety”

Hmm sounds just like the trolls and antivaxxers who’ve been so agitated lately …

11.12.2025 08:52 — 👍 11    🔁 1    💬 0    📌 0

zu klein ...

11.12.2025 02:56 — 👍 0    🔁 0    💬 0    📌 0

yeah no worries mate ...

10.12.2025 00:01 — 👍 1    🔁 0    💬 0    📌 0

So I interpret the results above as including a median reinfection rate of ~1-2 over their "Post-COVID" time period.

Populations in many other countries would have had higher reinfection rates. A few might be lower eg Japan, NZ, SE Asia.

09.12.2025 23:44 — 👍 1    🔁 0    💬 1    📌 0
Post image

There wasn't any data on COVID infection levels in China that period, but they did continue sharing genomic sequencing samples. From that, I assume they had a couple of significant waves: BA.2.86 (JN.1) "Pirola" then XDV.

NB.1.8.1.* also made a clean sweep in early 2025- usually means a wave.

09.12.2025 23:41 — 👍 2    🔁 0    💬 1    📌 0

Merci pour le coup de pouce!

09.12.2025 22:48 — 👍 2    🔁 0    💬 1    📌 0

Thanks for the feedback Amy, I‘m glad it is useful.

09.12.2025 22:45 — 👍 0    🔁 0    💬 0    📌 0

YMMV

09.12.2025 22:44 — 👍 0    🔁 0    💬 0    📌 0

Thanks so much for adding this context Dr Noor. It’s something I was definitely thinking about when I saw that chart, but I try to constrain myself to what the data says directly.

It’s also a hard reality to face, considering all those with CVD I’ve lost in recent years, and all those still at risk

09.12.2025 22:15 — 👍 15    🔁 1    💬 0    📌 0

Thanks Dr Noor. I really appreciate your feedback and support!

09.12.2025 22:05 — 👍 4    🔁 0    💬 0    📌 0

I’d guess that would be quite low, in China or anywhere else - perhaps under 10%?

We had a chance of a second year of lower transmission with weaker variants that would’ve given some respite, but now BA.3.2.* ”Cicada“ is looming …

09.12.2025 22:04 — 👍 0    🔁 0    💬 0    📌 0
Post image

I'm sure they will be OK, in the long run ...

h/t @ebharrington.bsky.social

09.12.2025 10:43 — 👍 2    🔁 0    💬 0    📌 0

Report Link:
mike-honey.github.io/covid-19-au-...
🧵ends

09.12.2025 10:05 — 👍 11    🔁 2    💬 1    📌 0
Post image

On a per-capita basis, Active Aged Care Staff Cases in South Australia have been higher than in other states, for a few weeks now.
🧵

09.12.2025 10:05 — 👍 16    🔁 5    💬 1    📌 0
Post image

Australian COVID-19 weekly stats update:

The risk estimate rose slightly, to 0.1% “Currently Infectious”, or 1-in-1,083.

That implies a 3% chance that someone is infectious in a group of 30.

#COVID19 #SARSCoV2 #Australia
🧵

09.12.2025 10:05 — 👍 39    🔁 8    💬 1    📌 2

Yes I have noticed that! A few seemed quite agitated, by BlueSky standards.

09.12.2025 09:56 — 👍 4    🔁 0    💬 1    📌 0

In the "All Patients" cohort (left chart), those selected Lymphocyte subsets were "only" about 9% below the baseline at the end of the study period. Changing by 9% at a rate of 3% per year would take a further 3 years.

09.12.2025 06:37 — 👍 2    🔁 0    💬 1    📌 0

What Im referring to is usually brief, along the lines of:

“I’m insanely angry about what you posted, I have nothing relevant to say or share to rebut you, but arrrggghhh!”
[with many typos, grammar errors etc]

09.12.2025 03:50 — 👍 3    🔁 0    💬 0    📌 0

I'm no fan of LLMs, but this seems harsh. The content I'm seeing is often unintelligible, borderline insane. I assume that only a human with broken cognitive and empathy systems could produce it.

Perhaps I'm naive about the capabilities of LLMs?

09.12.2025 00:01 — 👍 6    🔁 0    💬 1    📌 0

If they just dumped all their data, I would've faced a much greater challenge to correctly integrate it.

I do wish their format was a bit more open - tables in a Word doc usually need further processing to turn into data. But that's a routine chore.

08.12.2025 23:59 — 👍 0    🔁 0    💬 0    📌 0

I haven't seen any examples with full datasets.

But from my viewpoint, this paper has taken the right approach. They've shared the data that was shown in their charts/figures with a bit more context (e.g. IQRs, P-values etc). Their appendix is organised by Figure, so I could quickly understand it.

08.12.2025 23:59 — 👍 1    🔁 0    💬 2    📌 0

Thanks for the feedback Kolt! I really appreciate that.

08.12.2025 23:34 — 👍 9    🔁 0    💬 0    📌 0

* a further 3 years

So around 5 years total, for the cohort in that study.

08.12.2025 23:34 — 👍 1    🔁 0    💬 2    📌 0

It looks like the cardiovascular patient cohort was only ~2,000 or 5% of the total ~40,000. So some influence, but not major.

I only have access to the data shared publicly, in the Appendix Supplementary materials. It doesn't seem that detailed.

08.12.2025 23:32 — 👍 3    🔁 0    💬 2    📌 0

I was inspired by the discussions around this paper to integrate the data and try some alternative visualisations:
bsky.app/profile/mike...

08.12.2025 23:23 — 👍 0    🔁 0    💬 0    📌 0

I was inspired by the discussions around this paper to integrate the data and try some alternative visualisations:
bsky.app/profile/mike...

08.12.2025 23:22 — 👍 1    🔁 0    💬 0    📌 0

I was inspired by the discussions around this paper to integrate the data and try some alternative visualisations:
bsky.app/profile/mike...

08.12.2025 23:22 — 👍 3    🔁 0    💬 1    📌 0

I was inspired by the discussions around this paper to integrate the data and try some alternative visualisations. I rebuilt Figure 3 as a % change from the Baseline, which shows the drops across the subsets more clearly IMO.
bsky.app/profile/mike...

08.12.2025 23:21 — 👍 1    🔁 0    💬 0    📌 0

To be fair, the vibes on Xitter have also shifted lately - fewer sane posts and replies, more insane antivaxxers who have also fallen for every other insane conspiracy theory.

I expect they are energised by the current clown show that is US health policy.

08.12.2025 22:29 — 👍 14    🔁 1    💬 4    📌 0

* a further 3 years

So around 5 years in total.

Median figures across a population: YMMV

08.12.2025 19:41 — 👍 3    🔁 1    💬 0    📌 0

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