Jonas Windhager

Off to the #NRSE25 Nordic-RSE conference and on to the #BIIF25 BioImage Informatics Finland symposium - can't wait!

19.05.2025 05:04 — 👍 8    🔁 1    💬 0    📌 0

OSF

🚀 We’re very excited to share our latest preprint on OME-Zarr! 🚀

Our report on the 2024 OME-NGFF Workflows Hackathon is a deep dive into the status of OME-Zarr and the great work that happened last November at the BioVisionCenter in Zurich.

🔗 Read the preprint: osf.io/preprints/bi...

🧵 (1/15)

11.03.2025 11:58 — 👍 43    🔁 22    💬 1    📌 2

As long as it's reproducible... 😋

09.12.2024 16:20 — 👍 1    🔁 0    💬 0    📌 0

Raster image processing in progress at the #Nextflow for #BioImageAnalysis #Hackathon at #VIB #Leuven

06.12.2024 17:14 — 👍 6    🔁 0    💬 1    📌 0

Spatially clustering with @acorbat.bsky.social for the Crick BioImage Analysis Symposium #CBIAS2024

25.11.2024 21:05 — 👍 14    🔁 2    💬 0    📌 1

Hackathon group picture in the lecture room

Hackathon group picture in the restaurant (where not everyone fit on the picture unfortunately)

Josh Moore giving a talk at the hackathon

Matt McCormick asking a question

This week, we're hosting the #OME_NGFF_Hackathon 2024 at the BioVisionCenter at the University of Zurich. We're bringing together 40 motivated researchers and specialist for #OMEZarr workflows, #OMEZarr Python tools & #OMEZarr Java tools. (1/3)

20.11.2024 22:30 — 👍 40    🔁 15    💬 1    📌 1

What better way to get hyped for the OME-NGFF workflows hackathon at #BioVisionCenter #UZH than to attend the #OME-NGFF roadmap outlook with a view on the North Sea! @joshmoore.bsky.social @normanrz.bsky.social @mattmccormick.bsky.social

18.11.2024 15:10 — 👍 6    🔁 0    💬 0    📌 0

Great comp-bio job opportunity in one of the most beautiful places in the heart of the Alps.

01.03.2024 08:49 — 👍 4    🔁 6    💬 0    📌 0

All models are wrong and yours are useless: making clinical prediction models impactful for patients - npj Precision Oncology npj Precision Oncology - All models are wrong and yours are useless: making clinical prediction models impactful for patients

Excellent commentary - "All models are wrong and yours are useless: making clinical prediction models impactful for patients"

29.02.2024 14:48 — 👍 3    🔁 3    💬 0    📌 0

Thanks @simonfn.bsky.social for sharing and for the invite to the Bluesky!👋

And yes, we have a job opening - come work with us @ www.scilifelab.se/units/bioima... ! 💻🔬🦠

Details on forum.image.sc/t/bioinforma...

05.02.2024 14:44 — 👍 6    🔁 1    💬 0    📌 0

That's us! Took some time to get bsky... Please consider applying, and thanks so much for sharing @simonfn.bsky.social

04.02.2024 22:47 — 👍 8    🔁 1    💬 0    📌 0