Automated removal of corrupted tilts in cryo-electron tomography pubmed.ncbi.nlm.nih.gov/40741136/ #cryoEM
02.08.2025 05:16 โ ๐ 6 ๐ 3 ๐ฌ 0 ๐ 0@danielhurdiss.bsky.social
Assistant Professor at Utrecht University ๐ณ๐ฑ We use #cryoEM and molecular #virology techniques to study the infection mechanisms of +ssRNA viruses. https://www.uu.nl/medewerkers/DLHurdiss Views are my own.
Automated removal of corrupted tilts in cryo-electron tomography pubmed.ncbi.nlm.nih.gov/40741136/ #cryoEM
02.08.2025 05:16 โ ๐ 6 ๐ 3 ๐ฌ 0 ๐ 0๐จ new paper alert ๐จ
Here, we present a method for designing protein nanoparticles with two unique faces that can bring together distinct biological targets at controlled distances!
This project was led by Dr. Sanela Rankovic is out now in Nature Materials: www.nature.com/articles/s41...
New review paper from the influenza group
@utrechtvirology.bsky.social
together with Mengying Liu and Erik de Vries on virion motility of sialoglycan-cleaving respiratory viruses through mucus and on the surface cells in NPJ viruses @natureportfolio.nature.com
doi.org/10.1038/s442...
"Respiratory viral infections awaken metastatic breast cancer cells in lungs"
www.nature.com/articles/s41...
Excited to get some of my PhD work published! Utilising single particle cryo-EM we display convergent recognition by three lineages of lymphocyte to the same epitope.
#gdTcells #CryoEM
Now out in Structure: Paper on high-resolution #cryoEM using the 100 kV Tundra cryo-TEM by Dimple Karia, Adrian Koh, @abhaykot.bsky.social, @lingboyu.bsky.social, @landerlab.bsky.social and many others. Happy to have contributed to this effort. Check it out:
www.sciencedirect.com/science/arti...
Preprint on tandem split-GFP influenza viruses is now up! We strung 7 copies of GFP11 together to make a bright virus with minimal fitness defects. Fluorescence requires GFP1-10 from cells, so we made a few that are relevant for flu. See this fluorescent love story: www.biorxiv.org/cgi/content/...
28.07.2025 15:47 โ ๐ 29 ๐ 11 ๐ฌ 0 ๐ 0Mix-it-up: Accessible time-resolved cryo-EM on the millisecond timescale www.biorxiv.org/content/10.1101/2025.07.22.666177v1 #cryoEM
27.07.2025 18:40 โ ๐ 6 ๐ 5 ๐ฌ 0 ๐ 0How does #herpes hijack a human phosphatase to promote virus replication? We have a new @biorxivpreprint.bsky.social preprint showing how #HSV and #VZV use a novel motif to compete with canonical cellular #PP1 adaptors.
www.biorxiv.org/content/10.1...
๐งต๐
New preprint: In situ Architecture of #Plasmodesmata.
Using #cryoET, #AlphaFold & proteomics, we uncover the native organization of plant intercellular nanopores.
๐ doi.org/10.1101/2025...
๐งช๐งต1/n
#teamtomo #PlantScience #Physcomitrium #Arabidopsis #cryoEM
I am super excited to announce that I will be starting my lab at the Department of Pharmacology of the University of Zurich in Switzerland next year!
25.07.2025 07:48 โ ๐ 216 ๐ 39 ๐ฌ 23 ๐ 5Capsid Restructuring Activates Semi-Conservative dsRNA Transcription in Cystovirus ฮฆ6 www.biorxiv.org/content/10.1101/2025.07.23.666269v1 #cryoEM
25.07.2025 07:10 โ ๐ 2 ๐ 2 ๐ฌ 0 ๐ 0"Development of a live-cell imaging assay to elucidate spatiotemporal dynamics of extracellular vesicle fusion with target cells"
www.biorxiv.org/content/10.1...
HKU5 bat merbecoviruses engage bat and mink ACE2 as entry receptors pubmed.ncbi.nlm.nih.gov/40707428/ #cryoEM
25.07.2025 10:43 โ ๐ 1 ๐ 1 ๐ฌ 0 ๐ 0Exciting new work from my @ciddpsu.bsky.social colleagues showing that pandemic H1N1 immunity reduces susceptibility to H5N1 infection and disease in ferrets.
24.07.2025 03:03 โ ๐ 24 ๐ 13 ๐ฌ 1 ๐ 0Happy to share the latest work from the lab, led by @mudgal17.bsky.socialโฌ, in collaboration with the Weis lab @ethzurich.bsky.social.
How do nuclear membranes fuse during NPC assembly? We answer this question in our latest work, where we identify a new mechanism for membrane fusionโฆ (1/13)
Delighted to see our publication with industry partners out! ๐
Huge shoutout to @jbrwhite.bsky.social and @oksana-degtjarik.bsky.social for their contributions to the structural work!
Many thanks to @chingshinhuang.bsky.social & the whole team for an excellent collaboration!
#CryoEM #drugdiscovery
Finally out!
Iโm thrilled to share our new paper (Wolin et al., Cell 2025).
This paper describes SPIDR, a high-throughput method for mapping RBP binding sites.
By combining #SPIDR with #cryoEM, we identified the exact binding site of LARP1 within the #mRNA channel of the 40S ribosomal subunit.
That's a wrap! The results of the first #cryoEM heterogeneity challenge are up on biorxiv!
biorxiv.org/content/10.110
The EMPIAR datasets related to my work on human cystathionine beta-synthase are now released. Hopefully they are useful unusual filament cases for #cryoEM data processing
www.nature.com/articles/s41...
1. www.ebi.ac.uk/empiar/EMPIA...
2. www.ebi.ac.uk/empiar/EMPIA...
3. www.ebi.ac.uk/empiar/EMPIA...
We sequenced the anti-RSV-F antibody 131-2a by mass spec and determined its epitope by cryoEM. New insights in postfusion specific binding and antigenic site I. Now published in ACS Infectious Diseases @pubs.acs.org.
pubs.acs.org/doi/10.1021/...
@xdh.bsky.social @hangryhobbit.bsky.social
Recently I learnt that EMBL-EBI has a free online course about AlphaFold โ how it works, strengths and limitations, how to use it โ and it's very good!
There are also little quizzes and interactives.
www.ebi.ac.uk/training/onl...
The Trump administration is making viruses great again | Arwa Mahdawi
19.07.2025 13:46 โ ๐ 274 ๐ 109 ๐ฌ 24 ๐ 12Virus glycoprotein nanodisc platform for vaccine design pubmed.ncbi.nlm.nih.gov/40666859/ #cryoEM
18.07.2025 01:20 โ ๐ 2 ๐ 1 ๐ฌ 0 ๐ 0Cryogenic Electron Tomography Redefines Herpesvirus Capsid Assembly Intermediates Inside the Cell Nucleus pubmed.ncbi.nlm.nih.gov/40666836/ #cryoEM
18.07.2025 04:58 โ ๐ 6 ๐ 3 ๐ฌ 0 ๐ 0"A highly potent human antibody neutralizing all serotypes of BK polyomavirus"
journals.plos.org/plospathogen...
As Requested - A Starter Pack of PIs in Biology (or adjacent) fields who are recruiting POSTDOCS! Please don't hesitate to reach out if you wish to be added! go.bsky.app/4gbXXR3
18.07.2025 18:33 โ ๐ 122 ๐ 79 ๐ฌ 15 ๐ 3Calicivirus assembly and stability are mediated by the N-terminal domain of the capsid protein with the involvement of the viral genome www.biorxiv.org/content/10.1101/2025.07.14.664651v1 #cryoEM
17.07.2025 07:11 โ ๐ 2 ๐ 3 ๐ฌ 0 ๐ 0๐จ New @biorxivpreprint alert! ๐จ
We are thrilled to share our latest findingsโbuilding on our earlier work on suppressors of helper NLRs of the NRC familyโa Phytophthora infestans L-shaped effector captures resistosome assembly intermediates of tomato NRC3!
www.biorxiv.org/content/10.1...
1/10
Your sleep pressure is powered by your mitochondria! Sleep, energy, and ageing are all connected through mitochondrial bioenergetics in neurons. Brilliant work from Gero Miesenbรถckโs lab, just out in Nature @nature.com
www.nature.com/articles/s41...