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Collaborative Computational Project for Electron cryo-Microscopy

@ccpem.bsky.social

The Collaborative Computational Project for electron cryo-microscopy (CCP-EM) supports users and developers in biological EM. CCP-EM is based at STFC and core funded by MRC both of which are part of UKRI https://www.ccpem.ac.uk/

388 Followers  |  30 Following  |  16 Posts  |  Joined: 24.02.2025  |  1.6242

Latest posts by ccpem.bsky.social on Bluesky

Downloads – CCP-EM

We are pleased to announce Doppio version 1.4! Available here www.ccpem.ac.uk/software/dow...

04.11.2025 17:38 β€” πŸ‘ 14    πŸ” 6    πŸ’¬ 0    πŸ“Œ 2

Great study of a flexible protein-DNA complex, with contributions from CCP-EM's Agnel.

29.09.2025 20:03 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Post image Post image Post image

🌟 Awesome vEM Images Competition deadline extended to Oct 6, 5 PM CT! 🌟

Submit to one or both categories:
1️⃣ The Power of EM
2️⃣ Bringing Meaning to the Data

πŸ† $250 for 1st, $100 for 2nd & 3rd (each category)

πŸ”— www.volumeem.org/awesome-imag...

Details and last year's winning images ⬇️

29.09.2025 09:42 β€” πŸ‘ 8    πŸ” 6    πŸ’¬ 1    πŸ“Œ 2
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Towards a collaborative computational community for volumeEM Join us for the inaugural CCP-volumeEM Community Meeting, bringing together researchers, microscopists, biologists and computer scientists.

Still time to register for the inaugural CCP-volumeEM Community Meeting at the Crick on 3rd November www.eventbrite.co.uk/e/towards-a-...

24.09.2025 14:26 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
LinkedIn This link will take you to a page that’s not on LinkedIn

Applications are now open for the 2025 cohort of CoSeC Fellows (CoSeC is the umbrella organisation for CCPs). CoSeC Fellows will each be awarded funding of up to Β£3000 and gain access to collaborations across a wide range of research areas. lnkd.in/e2s8ZtDQ

17.07.2025 20:45 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
A logo of a volume EM "cube" of data on a stylised computer monitor with wires extending from the side. Text below reads "CCP-volumeEM - Collaborative Computational Project for Volume Electron Microscopy"

A logo of a volume EM "cube" of data on a stylised computer monitor with wires extending from the side. Text below reads "CCP-volumeEM - Collaborative Computational Project for Volume Electron Microscopy"

🚨 SAVE THE DATE 🚨
Inaugural CCP-volumeEM Community Meeting, 3rd November 2025 at @crick.ac.uk in London
"Towards a collaborative computational community for volume EM"
Timings: 12pm - 5.30pm, followed by networking reception

#volumeEM #BioImageAnalysis #VEM #CCPvolumeEM #CoSeC

09.07.2025 15:21 β€” πŸ‘ 13    πŸ” 11    πŸ’¬ 1    πŸ“Œ 1
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CCP-EM Spring Symposium 2025 - YouTube The 11th annual CCP-EM Spring Symposium was held from the 23-25th April 2025 at the East Midlands Conference Centre, University of Nottingham as a hybrid in-...

2025 Spring Symposium lectures are now up on our YouTube channel: www.youtube.com/playlist?lis...

15.05.2025 15:00 β€” πŸ‘ 11    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
2025 Spring Symposium XI – CCP-EM

Raw Zoom recordings of the majority of talks at the DLS BCI and CCP-EM Spring Symposium are available here... www.ccpem.ac.uk/symposium/sp...

07.05.2025 08:38 β€” πŸ‘ 14    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
2025 Spring Symposium XI – CCP-EM

First day of CCP-EM Spring Symposium following a great BCI User Meeting yesterday (and Ceilidh!). Zoom and Slack links at www.ccpem.ac.uk/symposium/sp...

24.04.2025 08:55 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Looking forward to teaching at the this great course in the summer in Padova... Register now! school2025.cristallografia.org #cryoEM #structural_biology #crystallography

13.04.2025 11:14 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Downloads – CCP-EM

New version of Doppio released today. This include new Servalcat Refine and Servalcat Mask jobs for atomic model building, the latest version of Moorhen and some minor bug fixes www.ccpem.ac.uk/software/dow...

02.04.2025 16:06 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modelling and machine learning Ease of access to data, tools and models expedites scientific research. In structural biology there are now numerous open repositories of experimental and simulated datasets. Being able to easily acce...

We've released a suite of tools profet, EMPIARreader and CAKED. If you want python tools to fetch protein structures, lazy load EMPIAR data and integrate into ML workflows take a look... arxiv.org/abs/2503.13329

02.04.2025 16:03 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Image processing for cryo-electron microscopy Cryo electron microscopy (cryo EM) is a major structural biology method for studying macromolecular complexes and cellular structures in their native states. Stable high resolution cryo microscopes, …

The ever popular EMBO practical course in cryoEM image processing, to be held at Birkbeck College London from 9th to the 16th September, is now open for registrations meetings.embo.org/event/25-cry...

19.03.2025 16:10 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Uncovering synaptic and cellular nanoarchitecture of brain tissue via seamless in situ trimming and milling for cryo-electron tomography Cell-cell communication underlies all emergent properties of the brain, including cognition, learning and memory. The physical basis for these communications is the synapse, a multi-component structur...

Out now: our preprint with Zach Freyberg, Jiying Ning and Jill Glausier on in situ cryoET of diverse brain tissues (www.biorxiv.org/content/10.1...), featuring a novel approach for preparing lamellae and the use of the CCP-EM framework for subtomogram averaging.

13.03.2025 14:05 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Major investment to establish an innovative research-community driven infrastructure for molecular biology - Scientific Computing, Science and Technology Facilities Council (STFC)

CCP-EM are joining forces with our sister projects CCP4, CCPN and CCPBioSim, the DRI-IMB team, see www.sc.stfc.ac.uk/major-invest...

11.03.2025 15:48 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Moorhen Moorhen is a molecular graphics web application based on the Coot desktop program.

Check out the new Moorhen gallery for some cool pics moorhen.org/gallery Moorhen is used by several projects including CCP-EM.

10.03.2025 19:36 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
2025 Spring Symposium XI – CCP-EM

Registration still open for our 11th Spring Symposium 23 – 25 April in Nottingham and virtual www.ccpem.ac.uk/symposium/sp... but limited accommodation remaining!

04.03.2025 21:52 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Hello bluesky people from the Collaborative Computational Project for Electron cryo-Microscopy!

04.03.2025 15:57 β€” πŸ‘ 9    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

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