π₯ Check out our new preprint on OmniPath, the prior knowledge resource for #SystemsBiology, and its brand-new OmniPath Explorer web app! π₯³
π Preprint: www.biorxiv.org/content/10.1...
π Explorer: explore.omnipathdb.org
OmniPath integrates 160+ resources for multi-omics analysis & modeling.
π§Άβ¬οΈ
17.09.2025 13:09 β π 38 π 21 π¬ 1 π 0
Excited to share that I started a new chapter in my career as a Teaching Fellow at Imperial College London! I really enjoy teaching, and look forward to the opportunities and challenges ahead.
03.07.2025 12:53 β π 0 π 0 π¬ 0 π 0
π Update on our preprint about Gene Regulatory Net (GRN) benchmarking π
We have included the original and decoupled version of SCENIC+, added a new metric and two more databases. Dictys and SCENIC+ outperformed others, but still performed poorly in causal mechanistic tasks.
doi.org/10.1101/2024... π
14.03.2025 10:34 β π 50 π 18 π¬ 2 π 0
We present NetworkCommons, a unified platform πͺ for network biology, providing access to omics data, knowledge, and contextualization methods, all with a consistent API ππ§΅
Paper: doi.org/10.1101/2024...
Docs: networkcommons.readthedocs.io
26.11.2024 09:44 β π 97 π 32 π¬ 2 π 4
Cross-Institutional Journal Club. We review immunology #preprints and highlight our favourites. Check our website π https://www.preprintclub.com/
Evolutionary biologist, bioinformatician, academic researcher, university lecturer π»π§¬π¦ ππ³οΈβπ
http://genet.elte.hu/bioinformatics
former Twitter (X) profile: https://x.com/EszterAri
Bluesky account for the journal Nature Reviews Immunology https://www.nature.com/nri/ Skyquakes from the editors.
Lecturer in Bioinformatics @livuni-ismib.bsky.social
Tackling complex #biodiversity, #disease, & worldwide food problems through #genetic & #multiomic data science. Scientific research innovator | Data wrangler, analyser, & interpreter | Food enthusiast.
Foundational tools for omics data (mostly in python).
R advocate #rstats | PhD @CHUVLausanne @unil | Immunology, Immunotherapy, Single-Cell RNAseq, Spatial Transcriptomics, Statistics and Machine Learning. π·βΈοΈποΈ
I treat every #singleCell gently. | PhD in Comp Bio at CHUV, Lausanne #OpenScience #SpatialTranscriptomics
Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
Inter-dimensional cancer biologist. Director of the @genomescience.bsky.social at @umbaltimore.bsky.social.
Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Chair of the Department of Biomedical Informatics at the University of Colorado School of Medicine. Research: transcriptomics, machine learning, public data - pick two of three. He/him. Views mine, not employer's.
Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Computational biologist, associate professor at University of Geneva, Department of Pathology and Immunology. Single-cell omics, bio data science, immunology & cancer research
Boeing Endowed Professor in the Allen School of Computer Science & Engineering at the University of Washington. Interested in AI/ML, computational biology, and AI in medicine. https://suinlee.cs.washington.edu/
Associate prof @JHUBME. Doing #spatialtranscriptomics #compbio #dataviz #rstats. Founder @cuSTEMized. Editor @PLOSCompBio. Alum @HarvardDBMI @mbhsmagnet.
Chief Data Scientist U of CA Healthγ»Director, Bakar Computational Health Sci Instituteγ»Distinguished Prof af UCSFγ»Entrepreneurγ»He/himγ»Opinions β¨ my own
Professor at #EPFL - #RNAVelocity inventor - Laboratory of Brain Development and Biological Data Science. Single-cell and spatial biologist studying brain development and lipids. #ERCStg investigator
Assistant Professor of Biostatistics, Boston University. Statistical genomics, genomic data science, open science, R programming https://lmweber.org/
