A checklist for designing and improving the visualization of scientific data
Nature Cell Biology - Creating clear and engaging scientific figures is crucial to communicate complex data. In this Comment, I condense principles from design, visual perception and data...
I gave in! After students asking for it, I now made a simple figure design checklist.
To help all scientists w/o graphic skills create clear, accessible, and truthful charts!
-> Out in @nature Cell Biology: rdcu.be/erwl4
#DataVisualization #PhD #SciComm
Thx for review @bethcimini.bsky.social + 2
18.06.2025 08:33 β π 295 π 117 π¬ 15 π 3
Peripheral infection wires T cells in the brain
www.nature.com/articles/s41...
18.06.2025 13:01 β π 9 π 5 π¬ 0 π 0
π Excited to release BoltzDesign1!
β¨ Now with LogMD-based trajectory visualization.
π Demo: rcsb.ai/ff9c2b1ee8
Feedback & collabs welcome! π
π: GitHub: github.com/yehlincho/Bo...
π: Colab: colab.research.google.com/github/yehli...
@sokrypton.org @martinpacesa.bsky.social
03.06.2025 01:30 β π 54 π 17 π¬ 1 π 0
Genome Medicine
A study published in Genome Medicine provides a framework to support the integration of a single untargeted proteomics test into routine diagnostic practice for the diagnosis of mitochondrial and potentially other rare genetic disorders.
bit.ly/4dKQ48e
#Epigenetics #MedSky
02.06.2025 03:30 β π 8 π 2 π¬ 0 π 0
Distinct type I and II interferon responses direct cortical and medullary thymic epithelial cell development
Single-cell transcriptomics identifies type I and II interferons as regulators of cortical and medullary thymic epithelial differentiation.
In #Science #Immunology, researchers at @stanfordmedicine.bsky.social studied #IFNs in human #fetal #thymus development. They found type I & II IFNs play distinct but critical roles in cortical & medullary thymic #EpithelialCell differentiation!
26.05.2025 22:06 β π 32 π 8 π¬ 0 π 0
Four pins from Two Photon Art. One is a brain cloud with crystals dangling off, another is a brown hand holding a test tube with flowers that says βkeep growingβ, another is a pride color rainbow brain, and the other is a saggital section of a brain.
These beautiful pins came in! ππΎ theyβre gifts for our MINDS post-bacc scholars who will be starting grad school in the fall β€οΈπ
β’
β’
Always love supporting women-owned, people-of-color-owned businesses β¨ but I especially love supporting my friends @christineliu.art π twophotonart.com
28.05.2025 00:47 β π 53 π 4 π¬ 1 π 2
Interferon-Ξ³ orchestrates leptomeningeal anti-tumour response - Nature
Independent of antigen presentation, migratory CCR7+ dendritic cells orchestrate the influx, proliferation and cytotoxic action of natural killer cells to control cancer cell growth in the leptomening...
I am pleased to share our recent publication, fruit of a wonderful collaboration with truly amazing colleagues @adrienneboire.bsky.social and @meningojan.bsky.social, whose work was a tour de force demonstrating that immunology in the brain is a different beast -> www.nature.com/articles/s41...
14.05.2025 15:52 β π 73 π 19 π¬ 1 π 1
Today in @nature.com , we report a spatial single-cell atlas of human cortical development, revealing surprisingly early specification of human cortical layers and areas.
We built an interactive browser to explore the spatial data: walshlab.org/research/cor...
Paper link below π
14.05.2025 17:24 β π 96 π 39 π¬ 5 π 2
JCI - The gut microbiome controls reactive astrocytosis during AΞ² amyloidosis via propionate-mediated regulation of IL-17 www.jci.org/articles/vie...
15.05.2025 10:57 β π 15 π 8 π¬ 1 π 0
#GliaPapers #GliaMay2025
MAY COVER
Carl Weigert, MihΓ‘ly (von) LenhossΓ©k, Gustav Retzius, and Hans Held surround hand drawn images of glia from the late 1800 and early 1900s. (see Kettenmann et al, onlinelibrary.wiley.com/doi/10.1002/...)
13.05.2025 15:02 β π 10 π 1 π¬ 1 π 0
Confocal micrograph
My mom used to love #FluorescenceFriday, so I will keep posting in her memory β€οΈ
This photo shows neurons in the hippocampus accumulating phospho-tau in our monkey model of Alzheimer's Disease.
Markers: Dapi π΅, Neun π΄, pTau 422π£, AT8π‘
02.05.2025 19:01 β π 197 π 24 π¬ 7 π 2
Register - IMMUNOLOGY2025β’
Join or renew your AAI membership for 2025 to immediately be eligible for discounted IMMUNOLOGY2025β’ registration fees.
Iβm excited to be speaking at #IMMUNOLOGY2025β’ on May 7 during the Lymphatic Immunophysiology Major Symposium! Join us to discuss the meningeal lymphatic system and its impact on brain immunity and function. #immunology #neuroimmunology
Register today! immunology2025.aai.org/register/ #AAI2025
04.05.2025 00:00 β π 8 π 1 π¬ 0 π 0
Inflammasome signaling in astrocytes modulates hippocampal plasticity
The function of immune pathways in homeostatic neurobiology remains underexplored.
Zengeler etΒ al. find that the inflammasome complex, typically associated with immune
responses, is involved in memory...
Excited to share our new work demonstrating a role for astrocytic inflammasome signaling in modulating hippocampal plasticity. @cp-immunity.bsky.social
All credit to Kristine Zengeler, who was the brainsπ§ and muscleπͺ behind this project and is a wonderful collaborator. www.cell.com/immunity/ful...
03.05.2025 01:45 β π 104 π 26 π¬ 11 π 3
It was so great for my lab to be able to contribute to this awesome study led by @fchrisbennett.bsky.social @nachoriko.bsky.social @waisenberg.bsky.social.
01.05.2025 06:45 β π 13 π 4 π¬ 2 π 0
Check out this paper from the Movahedi lab! Itβs a great companion to ours - showing the populations of brain macrophages that monocytes can replace.
Congrats to first author Jonathan Bastos!
01.05.2025 02:10 β π 24 π 11 π¬ 0 π 0
Next Generation Leaders
The Next Generation Leaders program at the Allen Institute aims to support emerging and diverse early-career researchers in bioscience who will contribute to cultivating new ideas to make a broad, tra...
Open call for Next Generation Leaders!
Our NGL program recognizes early career scientists with fresh and innovative perspectives. For 3 years, NGLs contribute to ongoing research and initiatives at the Allen Institute.
Apply by June 3. alleninstitute.org/about/people...
01.05.2025 18:17 β π 16 π 6 π¬ 0 π 2
Trumpβs Astonishing 100 Days, in 8 Charts (Gift Article)
By many measures, the opening months of President Trumpβs second term stand apart from those of essentially any modern president.
New NYT Article on the first 100 days in Charts
www.nytimes.com/interactive/...
Deeply concerning in many regards...
Sadly (although it is good for folks to understand), NIH funding slowdown made the cut...
1/2
30.04.2025 23:12 β π 29 π 14 π¬ 1 π 1
Mammalian cells eliminate nascent chains stalled during co-translational protein translocation by activating a ribosome UFMylation-dependent TAQC process at the ER. Ennis, Wang, Ye et al. establish a role for NEMF-mediated CAT tailing in TAQC. rupress.org/jcb/article/...
#ER_literature
22.04.2025 15:16 β π 9 π 3 π¬ 0 π 0
Our latest work now online in Cell:
Rewriting regulatory DNA to dissect and reprogram gene expression
Our new method (Variant-EFFECTS) uses high-throughput prime editing + flow sorting + sequencing to precisely measure effects of noncoding variants on gene expression
Thread π
17.04.2025 18:26 β π 116 π 28 π¬ 1 π 2
Events
Explore top neuroscience meetings and events. Filter events by topic, and see upcoming webinars compiled by @worldwideneuro.bsky.social.
Are you organizing a neuroscience conference? Share it with us at community@thetransmitter.org
#neuroskyence
www.thetransmitter.org/events/?utm_...
17.04.2025 20:19 β π 14 π 6 π¬ 0 π 0
Data Visualization & Biomedical Science. PhD in biology, trained in art, Associate Prof
Writes here: https://helenajamborwrites.netlify.app/
She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.
Physician-scientist at MD Anderson Cancer Center investigating cellular immunotherapy for solid cancers with a focus on the solid TME. Opinions are my own.
Scientist, Assistant Professor at MIT biology, #FirstGen
Structural biologist working on π₯οΈ protein design, machine learningπ€, crystallographyπ, and cryoEMπ¬. Avid weirdness connoisseur π©
π§ ucsf neuroscience postdoc
π psychedelic researcher
π¨ www.twophotonart.com
πͺ‘ weekend tattoo artist
Scientist Neurologist Knitter
all things neuroimmunology @ VIB Center for Cancer Biology
Assist. Prof. @ChildrensPhila & @PennMedicine.
Brain Development , Organoids, Cerebral Cortex.
Postdoc @ChrisAWalsh1; PhD @UPenn_SongMing
el psy congroo.
Wellcome Career Development fellow investigating how the immune system modulates behaviour during chronic challenges
CNS immunology, stroma, and barriers | Group Leader @Monash | former postdoc in @kipnislab @WUSTL | Kiwi π₯ π³πΏ
#TCellsMakeYouSmart
This is my personal account where I will likely talk mostly about science⦠produced by us and others.
Bluesky account for the journal Nature Reviews Immunology https://www.nature.com/nri/ Skyquakes from the editors.
Cutting-edge research in immunology from around the world, and commentaries by thought leaders. Cell Press. Tweets by Immunity editors.
Asst. Professor of Biological Chemistry & Pharmacology, Center for RNA Biology, The Ohio State University; we study ribosomes & mRNA translation in human biology & disease; advocate for equity & diversity; www.kearselab.org
Postdoctoral Research Associate at St Jude Childrenβs Research Hospital | RNA Biologist
Postdoc in F. Chris Bennettβs lab at UPenn using #microglia replacement to understand the influence of brain macrophages on neurodegenerative disease
substance use/cannabis and trauma/stress + genetics/epigenetics + statistics + r programming.
associate professor at unm and casaa.
views are my own.