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Martin Pacesa

@martinpacesa.bsky.social

Structural biologist working on πŸ–₯️ protein design, AI, and #CRISPR-Cas gene editing βœ‚οΈπŸ§¬ Avid weirdness connoisseur 🎩

3,359 Followers  |  363 Following  |  209 Posts  |  Joined: 03.10.2023  |  1.9699

Latest posts by martinpacesa.bsky.social on Bluesky

It's been ~13 years ago in the lab of Grant Jensen, when Martin @pilhoferlab.bsky.social showed me how to prepare media, do first protein preps and negative stain EM. I had no idea how much more I’d learn from him over the next years - THANK YOU MARTIN for this incredible ride πŸ™πŸ™πŸ™

01.08.2025 13:48 β€” πŸ‘ 38    πŸ” 2    πŸ’¬ 4    πŸ“Œ 0

Huge congrats to Gregor, he is a super cool and smart guy! Most certainly apply if you can

01.08.2025 13:23 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Structure Prediction and Design using AlphaFold – Sami Chaaban
YouTube video by MRC Laboratory of Molecular Biology Structure Prediction and Design using AlphaFold – Sami Chaaban

Great talk by @sami-c.bsky.social about the proper use and caveats of AlphaFold2/3 predictions, highly recommended to watch www.youtube.com/watch?v=z7vy...

01.08.2025 09:53 β€” πŸ‘ 38    πŸ” 11    πŸ’¬ 1    πŸ“Œ 0
Embrace the Mess This is the official web page for the James Fraser Lab at UCSF.

Protein-ligand complexes are all the rage with OpenBind+other efforts launching

3 amazing papers describing 229 protein-ligand structures just dropped in @actacrystd.iucr.org

A tremendous teaching text, but I disagree on the discussed potential for misuse. Read more

fraserlab.com/2025/07/29/E...

29.07.2025 20:38 β€” πŸ‘ 33    πŸ” 12    πŸ’¬ 1    πŸ“Œ 0

Excellent

29.07.2025 21:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thank you everyone for the congratulations and the large number of applications! I want to specifically encourage applications for these positions:
* Postdoc in structural biology (cryoEM, ideally with X-ray too)
* Full time lab manager/technician with wetlab experience

29.07.2025 18:01 β€” πŸ‘ 21    πŸ” 7    πŸ’¬ 0    πŸ“Œ 0

Yeah fair

29.07.2025 17:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Yeah Roche is waaaaaaaay too high up in there

29.07.2025 17:01 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

(double checked my own papers to make sure I didn’t write it too somewhere)

29.07.2025 16:10 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

I agree with you, I cringe every time I see atomic structure in the title and it’s like 3A

29.07.2025 16:07 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Ouch πŸ€•

29.07.2025 14:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Congratulations Asaf!!

29.07.2025 14:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Preview
Kiwa is a membrane-embedded defense supercomplex activated at phage attachment sites Zhang, Todeschini, and Wu et al. show that the bacterial defense system Kiwa senses phage attachment at the membrane and assembles a transmembrane complex that halts infection by blocking phage DNA re...

Thrilled to see our Kiwa story out today! A membrane-associated supercomplex that senses infection and blocks replication and transcription.

www.cell.com/cell/fulltex...

Huge congratulations to Yi and Zhiying for bringing it home, to Thomas for starting us off, and to all the collaborators.

28.07.2025 19:43 β€” πŸ‘ 106    πŸ” 48    πŸ’¬ 10    πŸ“Œ 5

Stay tuned for details on the 6th edition of MLSB, officially happening this December in downtown San Diego, CA!

28.07.2025 15:41 β€” πŸ‘ 14    πŸ” 7    πŸ’¬ 0    πŸ“Œ 0
Preview
A two year post-doctoral position at the BacterialGenome Plasticity Unit starting October 1st - Research

Postdoc position to work at the Institut Pasteur with Alex Kaminski and Didier Mazel on Z-DNA phages ! research.pasteur.fr/en/job/a-two...

28.07.2025 14:54 β€” πŸ‘ 16    πŸ” 16    πŸ’¬ 2    πŸ“Œ 0

Due to some server issues, some applications have been lost, particularly the ones submitted within 12h of the announcement, if that’s your case, it’s better to resubmit, sorry everyone πŸ™πŸ»

26.07.2025 13:50 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Thank you Leo ❀️

26.07.2025 07:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

We notified authors about the helical nature of the peptides, the default settings make exclusively helices for peptides to increase success rates, one has to change the helicity settings to get more diversity.

26.07.2025 07:29 β€” πŸ‘ 5    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Excellent nanomolar peptide design success rates with BindCraft!

26.07.2025 07:14 β€” πŸ‘ 22    πŸ” 6    πŸ’¬ 1    πŸ“Œ 0

Thank you Sjors!

25.07.2025 18:42 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

HOW COOL IS THIS? Researchers have developed a DENTAL FLOSS that can DELIVER vaccines THROUGH the gums, a method that could one day offer a NEEDLE-FREE alternative for vaccination. This approach effectively stimulated immunity AND provided FULL protection against a lethal strain of influenza. πŸ§ͺπŸ§΅β¬‡οΈ

25.07.2025 16:00 β€” πŸ‘ 3510    πŸ” 1026    πŸ’¬ 112    πŸ“Œ 74

So cool!

25.07.2025 16:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Too kind ❀️

25.07.2025 13:37 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thank you Pavel!

25.07.2025 08:52 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thanks Marcin, that’ super kind ❀️

25.07.2025 08:39 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Submit your application with attached CV and motivation letter to applications@pacesalab.com (applications elsewhere will be ignored). Apologies up front if I won’t be able to reply to everyone!

25.07.2025 07:48 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

I am looking to interview prospective PhD students, Postdocs and technicians, particularly with wetlab expertise, but computational skills are a bonus.

25.07.2025 07:48 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 1

We will be focusing on marrying high throughput structural biology methods, protein design, and AI to model and characterise dark parts of the protein-nucleic acid interactome.

25.07.2025 07:48 β€” πŸ‘ 10    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
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I am super excited to announce that I will be starting my lab at the Department of Pharmacology of the University of Zurich in Switzerland next year!

25.07.2025 07:48 β€” πŸ‘ 216    πŸ” 39    πŸ’¬ 23    πŸ“Œ 5

16 🫠

25.07.2025 04:28 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

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