Congratulations, Michael Dorrity and Anna Erzberger!
The two EMBL Heidelberg group leaders have received ERC Starting Grants that will enable ambitious projects related to developmental timing and tissue self-organisation, respectively.
Learn more: www.embl.org/news/awards-...
04.09.2025 10:09 โ ๐ 63 ๐ 8 ๐ฌ 1 ๐ 1
Want to acquire #ExM images like this and help us understand the true extent of cytoskeletal diversity across the tree of life? This position might be for you!
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
With @dudinlab.bsky.social
@embl.org @biology-unige.bsky.social @moorefound.bsky.social
07.08.2025 18:12 โ ๐ 105 ๐ 55 ๐ฌ 1 ๐ 2
Thanks for sharing! I think scale-hierarchical โzonesโ offer an interesting lens on sub-cellular information flow. Iโd be curious how compression, selection, or computation at each scale could be approached analytically, especially with physical and emergent properties shaping the flow.
20.06.2025 18:04 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0
10/ Huge thanks to my incredible coauthors Hiral Shah (@hiralshah.bsky.social), Roman Belousov, Gautam Dey (@gautamdey.bsky.social), and Anna Erzberger -- this project was a true collaboration, combining theory, modelling, and experimental validation. So grateful for your brilliance and support!
18.06.2025 17:07 โ ๐ 4 ๐ 2 ๐ฌ 1 ๐ 0
Expansion microscopy image, and accompanying sketch, of S. arctica nucleus with labelled microtubules and nuclear pore complexes.
9/ The observed patterns matched our model, and their parameters place these systems near the predicted optimal filtering regime -- These NPCs may act as efficient spatial thresholding filters! #Microscopy #QuantBio #Microtubules #UExM
18.06.2025 17:07 โ ๐ 12 ๐ 4 ๐ฌ 1 ๐ 1
8/ To test our predictions, we used expansion microscopy to examine distributions of nuclear pore complexes in Sphaeroforma arctica.
18.06.2025 17:07 โ ๐ 2 ๐ 1 ๐ฌ 1 ๐ 0
Plot of the mutual information between input energy profiles and output density profiles as a function of parameter ratio, for various input dimensions.
7/ Surprisingly (and excitingly!), when we analysed real biological systems from the literature, their particle parameters often fell within these optimal regions, suggesting that cells might indeed be taking advantage of this mechanism! #EvoDevo #Biophysics
18.06.2025 17:07 โ ๐ 4 ๐ 1 ๐ฌ 1 ๐ 0
6/ We identified an optimal phase space region where this classification works best. Interestingly, this region depends on the dimensionality of the input signal.
18.06.2025 17:07 โ ๐ 2 ๐ 1 ๐ฌ 1 ๐ 0
5/ Cells could perform a binary classification of spatial cues based on particle organisation -- transmitting only โrelevantโ information across compartment interfaces (like membranes). Itโs a simple yet energy-efficient and powerful way for cells to decide what signals to pass on. #CellSignaling
18.06.2025 17:07 โ ๐ 3 ๐ 1 ๐ฌ 1 ๐ 0
4/ The particle distribution therefore acts like a spatial thresholding filter, providing a new way to think about how membrane-bound structures manage information flow. #MembraneBiology #InformationProcessing
18.06.2025 17:07 โ ๐ 3 ๐ 1 ๐ฌ 1 ๐ 0
Plot of equilibrium particle density dependence on environment interaction energy, which takes the form of a sigmoid when there are particle repulsions, and is exponential if not.
3/ We found that when surface-associated particles (e.g., proteins) repel each other and interact with nearby structures, their density exhibits a nonlinear, sigmoidal response to spatial features in the environment.
18.06.2025 17:07 โ ๐ 3 ๐ 1 ๐ฌ 1 ๐ 0
2/ Living systems use chemical signals to communicate, but physical properties like repulsion between particles also shape how information flows. We propose a physics-based mechanism by which cells could interpret spatial cues. #CellBiology #Biophysics #Physics
18.06.2025 17:07 โ ๐ 2 ๐ 1 ๐ฌ 1 ๐ 0
Sketch of membrane-enclosed compartment with particles on its surface, which interact with an adjacent structure
๐งต ๐งช 1/ Hi! Iโm excited to share our latest work, now on arXiv:
Repulsive particle interactions at cellular interfaces enable selective information processing (arxiv.org/abs/2506.14739)
Where we explore how the physical properties of living systems can help cells process spatial information.
18.06.2025 17:07 โ ๐ 43 ๐ 16 ๐ฌ 1 ๐ 4
Developmental Biologist working at the Francis Crick Institute. Neural tube, morphogens, and gene regulatory networks. Editor-in-chief, Development.
London ยท briscoelab.org
How are biological forms encoded? Group leader at IBDM Marseille, director of Turing Center for living systems (CENTURI). Professor at Collรจge de France, Paris: Dynamics of living systems
Theoretical Biophysics, PostDoc @Biozentrum Basel, previous @EMBL Heidelberg
Topics: Mechanochemical feedbacks | Self-organization and pattern formation | Information Theory
Comedian and renowned blood traitor.
PhD student @ncbsbangalore.bsky.social | Biophysics of growth, motility, and morphology | Undergrad @ IISER Bhopal | Exploring the squishy side of science with @tapomoy89.bsky.social
https://www.sreepadmanabh.com/
A biodiverse garden project by a Wildlife Photographer creating a wildlife haven, safe space and natural habitat to help birds and all nature to thrive in South Shropshire, no DMโs thanks. See more at www.thegardenjungle.co.uk and www.uniquephotoarts.com
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Ikmi lab at EMBL Heidelberg
Excited by emergent behaviors during development
Medical student at Heidelberg University
Bioinformatics Scientist / Next Generation Sequencing, Single Cell and Spatial Biology, Next Generation Proteomics, Liquid Biopsy, SynBio, Compute Acceleration in biotech // http://albertvilella.substack.com
Executive Director EMBL. I have an insatiable love of biology. Consultant to ONT and Cantata (Dovetail)
Assistant Professor @biozentrum.unibas.ch โข Theoretical biophysics โข Postdoc ISTAustria, PhD LMU Munich, MSc Cambridge University
www.biozentrum.unibas.ch/brueckner
How do molecules and cells create life? Follow @biozentrum.unibas.ch for the latest news on research & education.
Cell biologist ๐ฌ | Exploring the mysteries of centrosomes and cytoskeleton diversity๐๐ฆ | Postdoc at Centriole Lab, University of Geneva
Award-winning journalism focused on #climatechange, science, energy and policy. Subscribe to our free newsletters: http://bit.ly/CBnewsletters
PhD student @ MPI-NAT | Dept. of Cellular Logistics - Gรถrlich lab | nuclear pores, cargo transport, super-resolution, nanobodies โจ
I just really love shapes. I love it when things are shapes. And I love it even more when shapes are things
(Molecular model printer @3dmoleculardesigns.bsky.socialโฌโฌ, former rodent botherer, perennial cell enjoyer)
CS PhD student at Cornell :)
CMU CS โ23
https://erica-chiang.github.io
Associate Prof at U Penn. Learning, memory, sleep, neural network modeling...
Assistant Professor at Ohio State studying how we remember what we learn + how we learn from our memories
www.momentslab.org