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James Manton

@jamesdmanton.bsky.social

Applied physicist & microscopist/microscopologist

1,399 Followers  |  561 Following  |  368 Posts  |  Joined: 12.01.2024  |  1.9091

Latest posts by jamesdmanton.bsky.social on Bluesky

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We present multi-immersion Oblique Plane microscope (miOPM), a light-sheet platform that can be adapted to a wide range of applications, from sensitive live cell imaging to imaging organs and cleared tissues.
www.biorxiv.org/content/10.1...

06.10.2025 17:52 β€” πŸ‘ 111    πŸ” 42    πŸ’¬ 5    πŸ“Œ 2
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Male CNS Connectome A team of researchers has unveiled the complete connectome of a male fruit fly central nervous system β€”a seamless map of all the neurons in the brain and nerve cord of a single male fruit fly and the ...

Exciting news for #drosophila #connectomics and #neuroscience enthusiasts: the Drosophila male central nervous system connectome is now live for exploration. Find out more at the landing page hosted by our Janelia FlyEM collaborators www.janelia.org/project-team....

05.10.2025 15:40 β€” πŸ‘ 127    πŸ” 64    πŸ’¬ 2    πŸ“Œ 8
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Excellent opportunity for an enthusiastic #postdoc to join Kate McDole in @cellbiol-mrclmb.bsky.social, using interdisciplinary approaches to investigate tissue formation during early organogenesis in mouse embryos.
More info: www.nature.com/naturecareer...
Closes 20 OCT
#ScienceJobs #PostdocJobs

02.10.2025 08:53 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

LMB PhD studentship available in the Baum lab to use informatics to infer cell structure from genomic data in collaboration with the brilliant Tom Williams. If you write to me and I don’t reply - try again - the spam filter is hungry…

02.10.2025 09:04 β€” πŸ‘ 17    πŸ” 19    πŸ’¬ 1    πŸ“Œ 2
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πŸ“£πŸ“£We're seeking a postdoc to join us at the @mrclmb.bsky.social to investigate neuroimmune interactomes in tumour & viral immunity.
If you find fascinating & want to learn about #neuroscience & #immunology, tracing neurons, molecular biology & #flowcytometry, apply!
πŸ§ πŸ«πŸ‘€πŸ©ΈπŸ”¬
mrc.tal.net/vx/mobile-0/...

01.10.2025 11:26 β€” πŸ‘ 8    πŸ” 6    πŸ’¬ 0    πŸ“Œ 1
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Assistant/Associate Professor in Structural Biology, Biophysics or Biological Imaging

www.biozentrum.unibas.ch/open-positio...

#biozentrum #University #Basel #Professor #Structural #Biology #Biophysics #Biological #Imaging

29.09.2025 14:58 β€” πŸ‘ 48    πŸ” 53    πŸ’¬ 0    πŸ“Œ 5
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Bioimage Analysis Specialist | King's College London

BioImage analysis friends - King's are recruiting for a full-time, permanent facility position! Come and work with fun microscopes and fun people (and me!) - please share! www.kcl.ac.uk/jobs/126345-...

29.09.2025 09:48 β€” πŸ‘ 60    πŸ” 80    πŸ’¬ 0    πŸ“Œ 0
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Latest imaging data from our completely re-designed ExA-SPIM system.

Expansion-assisted imaging (3X expansion, 0.3 NA) enables brain-wide imaging with high-contrast and <400 nm effective resolution.

29.09.2025 16:04 β€” πŸ‘ 48    πŸ” 8    πŸ’¬ 2    πŸ“Œ 1

We were also concerned by that, so I thought we could use a cleared tissue lens and use Kramers–Kronig clearing to tune n to be just right.

Yeah, that doesn't seem to work... The gel shrinks quite a lot. I have a few more tricks to try before we give up, but you might also want to play with it.

29.09.2025 15:54 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

If you want to go further, then @adamkglaser.bsky.social is the person to talk to!

bsky.app/profile/adam...

28.09.2025 15:45 β€” πŸ‘ 6    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

@miguelcmestre.bsky.social is at the GEF25 with a poster on how we use them if you want a chat. He might also be able to give people a sneak-peek into the high-expansion-factor sectionable gel chemistries he's now working on to increase the effective working distance further still.

28.09.2025 15:43 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

We're big fans of the Zeiss 40x/1.0 with 2.5 mm WD (www.micro-shop.zeiss.com/en/us/shop/o...) and the Nikon 60x/1.0 with 2.8 mm WD (www.microscope.healthcare.nikon.com/en_EU/produc...). Both work great on our inverted microscopes when using an FEP coverslip (www.biorxiv.org/content/10.1...).

28.09.2025 15:43 β€” πŸ‘ 8    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Live stream of the talks at #GEF25! Experience the best of ExM first hand! Tomorrow 9 am it is me btw. Monday 9 am Ed Boyden himself!

27.09.2025 14:38 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

We have an open post-doc position in my group to study mRNA cleavage and polyadenylation using biochemical reconstitution and cryoEM.

Please get in touch if you are interested in joining this amazing team! πŸ”¬πŸ§¬πŸ€©
#RNA #cryoEM

27.09.2025 11:06 β€” πŸ‘ 55    πŸ” 51    πŸ’¬ 0    πŸ“Œ 1
Postdoctoral Scientist - Neurobiology - Dr Sven Truckenbrodt - LMB 2698 - Medical Research Council Location: Cambridge. Vacancy: Postdoctoral Scientist - Neurobiology - Dr Sven Truckenbrodt - LMB 2698. Closing Date: 09/10/2025, 23:55

The Molecular Brain Mapping group at the MRC-LMB is hiring! 🌈🧠

I'm looking for people who are excited about revealing the many molecular layers of the "hidden connectome" with expansion microscopy, in a highly intersectional environment exploring ideas in meta-science.

mrc.tal.net/vx/mobile-0/...

22.09.2025 08:09 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
Imaging Data Engineer - Neurobiology - Dr Sven Truckenbrodt - LMB 2697 - Medical Research Council Location: Cambridge. Vacancy: Imaging Data Engineer - Neurobiology - Dr Sven Truckenbrodt - LMB 2697. Closing Date: 09/10/2025, 23:55

The Molecular Brain Mapping group at the MRC-LMB is hiring! 🌈🧠

I'm looking for people who are excited about developing multimodal analysis and visualization tools to capture the "hidden connectome," in a highly intersectional environment exploring ideas in meta-science.

mrc.tal.net/vx/mobile-0/...

22.09.2025 08:12 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
Join the LMB's PhD programme!
Applications now open for October 2026
Deadline 2nd December 2025

Join the LMB's PhD programme! Applications now open for October 2026 Deadline 2nd December 2025

Calling all prospective PhD students! Why not consider the LMB for your PhD?
Applications are now open!
www2.mrc-lmb.cam.ac.uk/students/int...
General deadline: 2nd DEC
US Gates Scholarship deadline: 15th OCT

22.09.2025 15:30 β€” πŸ‘ 9    πŸ” 11    πŸ’¬ 0    πŸ“Œ 1
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Functional maps of a genomic locus reveal confinement of an enhancer by its target gene Genes are often activated by enhancers located at large genomic distances, and the importance of this positioning is poorly understood. By relocating promoter-reporter constructs into thousands of alt...

@science.orgπŸ§¬πŸ”¬Functional maps of a #genomic locus reveal confinement of an enhancer by its target #gene | Science www.science.org/doi/10.1126/...

22.09.2025 19:43 β€” πŸ‘ 39    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0

SCHEPHERD--the bioelectric cell herding platform built for YOU. Single cells, monolayers, organoids--this herds them all + new tricks. Plz try it-- we will *give* you parts! Teaser here of a steering a single cell. GS Yubin Lin's lifeblood with J. Yodh on piano; Celeste R. and Paul K. Thread 1/N

17.09.2025 17:20 β€” πŸ‘ 60    πŸ” 26    πŸ’¬ 4    πŸ“Œ 4
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Our new preprint is up! This is the main postdoc work of @wiesner-t.bsky.social focusing on exocytosis along the axon shaft and its regulation by the sub membrane actin-spectrin scaffold: www.biorxiv.org/content/10.1...
Read the thread below for a summary of our findings 🧡1/11

17.09.2025 14:54 β€” πŸ‘ 124    πŸ” 47    πŸ’¬ 6    πŸ“Œ 5

After seeing
@miguelcmestre.bsky.social @lancasterlab.bsky.social @jamesdmanton.bsky.social
's paper this week on deep and accessible ExM imaging with cerebral organoids, I think it's a good time to repost this Starter Pack of Expansion Microscopy people!
go.bsky.app/Qxks9WD

17.09.2025 22:04 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Multispectral live-cell imaging with uncompromised spatiotemporal resolution - Nature Photonics A tree-like arrangement of dichroic mirrors and multiple cameras coupled with an iterative spectral unmixing algorithm enables multispectral imaging of live cells in up to eight spectral channels with...

🚨Publication alert🚨
My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...

16.09.2025 10:20 β€” πŸ‘ 38    πŸ” 13    πŸ’¬ 3    πŸ“Œ 1

The final version of our multispectral microscopy manuscript is now online at Nature Photonics: www.nature.com/articles/s41...

The main additions are some further comparisons to yet more unmixing algorithms, in which we find that our algorithm is still the most accurate.

16.09.2025 07:43 β€” πŸ‘ 32    πŸ” 15    πŸ’¬ 1    πŸ“Œ 0
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Leaflet-specific phospholipid imaging using genetically encoded proximity sensors - Nature Chemical Biology An approach combining bioorthogonal chemistry with genetically encoded fluorogen-activating proteins enables subcellular imaging of phospholipids and glycans, as well as the visualization of lipid tra...

Very excited to share new work out today in @natchembio.nature.com on a new approach - FACES - for selectively imaging of phospholipids and other biomolecules at spatial resolutions down to individual membrane leaflets (1/n) www.nature.com/articles/s41...

15.09.2025 18:03 β€” πŸ‘ 160    πŸ” 67    πŸ’¬ 8    πŸ“Œ 7

The cat is officially out of the bag!

The LMB is home to a unique community of outstanding connectomics scientists β€” I'm so excited about adding my own molecular and expansion microscopy expertise to the mix!

This is going to be the most exciting journey of my scientific career β€” more soon! 🌈🧠

15.09.2025 09:54 β€” πŸ‘ 34    πŸ” 5    πŸ’¬ 5    πŸ“Œ 0

We present a simple method to easily increase the imageable depth of an expansion microscopy gel on a typical inverted microscope ten-fold, using some carefully placed FEP film and a water dipping objective lens:

15.09.2025 08:42 β€” πŸ‘ 65    πŸ” 30    πŸ’¬ 2    πŸ“Œ 0
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Research Group Leader in Chemical/Synthetic Biology at MRC Laboratory of Molecular Biology Start your UK &amp; international job search for academic jobs, research jobs, science jobs and managerial jobs in leading universities and top...

We are looking to recruit a tenure track group leader in the field of Chemical/Synthetic Biology (in the broadest sense) to lead a research program within the Division of Protein & Nucleic Acid Chemistry ( www.jobs.ac.uk/job/DNW809/r... ) at the MRC Laboratory of Molecular Biology (LMB).

14.07.2025 12:09 β€” πŸ‘ 27    πŸ” 33    πŸ’¬ 1    πŸ“Œ 4
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Rising Talent Fellowship - MRC Laboratory of Molecular Biology RISING TALENT FELLOWSHIP In 2024 the MRC Laboratory of Molecular Biology (LMB) launched the first round of their three-year fully funded fellowship for

I'll soon be recruiting a postdoc fellow to join us @mrclmb.bsky.social to continue developing our programme to understand neuroimmune modulationπŸ§ πŸ”¬πŸ§¬πŸ©ΈπŸ«
If you're interested in joining us check also @erc.europa.eu MSCA actions, @wellcometrust.bsky.social & www2.mrc-lmb.cam.ac.uk/recruitment/...
DM'me

09.07.2025 19:03 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

The only good use I've managed to find for generative AI is rewriting my paper abstracts in quatrain.

The Mind's Decay, A Fading Light

03.07.2025 20:47 β€” πŸ‘ 7    πŸ” 3    πŸ’¬ 2    πŸ“Œ 0
Niamh Burke (centre) receives the RMS Early Career Award from Lisa Maria Needham (left) and Michelle Peckham (right)

Niamh Burke (centre) receives the RMS Early Career Award from Lisa Maria Needham (left) and Michelle Peckham (right)

Massive congratulations to Niamh Burke @niamh-deburca.bsky.social on winning the 2025 @rmsearlycareer.bsky.social Early Career Award, with her talk on the enderscope community project, co-developing accessible imaging tools with the public. πŸ˜€πŸ™ŒπŸ”¬πŸ‘

@bioimaginguk.bsky.social

30.06.2025 17:13 β€” πŸ‘ 16    πŸ” 8    πŸ’¬ 1    πŸ“Œ 0

@jamesdmanton is following 20 prominent accounts