GitHub - Julie-Fabre/bombcell: Automated quality control, curation and neuron classification of spike-sorted electrophysiology data
Automated quality control, curation and neuron classification of spike-sorted electrophysiology data - Julie-Fabre/bombcell
🚀 We are excited to share that bombcell is now available in Python! 🐍 Automatically sort your units into good/MUA/noise/non-somatic using quality metrics and interpretable & adjustable classification thresholds.
pip install and play around with our toy dataset:
🔗 github.com/Julie-Fabre/...
13.06.2025 18:55 — 👍 60 🔁 23 💬 2 📌 2
Personally I 💙 bombcell (: works really well in removing non-somatic and noisy units. As for MUA vs single it’s a bit trickier and probably based on how many RPV one can accept but still does a good enough job
27.03.2025 16:42 — 👍 2 🔁 1 💬 0 📌 0
Averaging brain responses is not a great idea...
#neuroscience #neuroskyence
www.nature.com/articles/s41...
23.02.2025 16:27 — 👍 146 🔁 32 💬 8 📌 8
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Postdoc in Ilana Witten's lab. Former PhD student in Kenneth Harris and Matteo Carandini's lab. Follow for updates on bombcell and other Neuropixels software.
https://github.com/Julie-Fabre
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