Matti Javanainen's Avatar

Matti Javanainen

@javanainenm.bsky.social

Assistant Professor (computational physics), head of the BioInterfaces group @ Tampere University. https://research.tuni.fi/biointerfaces/ Molecular dynamics simulations of biomolecules ๐Ÿงฌ๐Ÿ–ฅ๏ธ๐Ÿ‘จโ€๐Ÿ”ฌ

87 Followers  |  91 Following  |  5 Posts  |  Joined: 13.10.2023  |  1.5754

Latest posts by javanainenm.bsky.social on Bluesky

A big thanks also to my long-time collaborator and friend @denysbiriukov.bsky.social, who served as an internal peer-reviewer for the simulation part of the work โ˜บ๏ธ

14.05.2025 09:33 โ€” ๐Ÿ‘ 7    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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I'm very proud to share new work reporting a lipid scrambling activity and pathway within the Sec61 protein translocon.

pubs.acs.org/doi/10.1021/...

14.05.2025 08:36 โ€” ๐Ÿ‘ 24    ๐Ÿ” 2    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

No ainakaan impaktia ei ole enรครค jaettu kahteen eri osioon sen mukaan, onko se tutkimusmaailmassa (ennen osiossa 1) vai sen ulkopuolella (ennen osio 5). ๐Ÿคทโ€โ™‚๏ธ

10.12.2024 13:22 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I have a colleague whose publishing process at BPJ was put to halt until they remove the revised manuscript from bioRxiv, which is not possible ๐Ÿคทโ€โ™‚๏ธ.

So heโ€™ll leave the revised preprint online, submit the manuscript elsewhere (benefiting from BPJโ€™s reviewer feedback), and BPJ is left with nothing ๐Ÿซข

23.11.2024 18:56 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

Doesnโ€™t really matter as all(?) journals are fine with preprints these days. By going journal first, I just save a minute or two by not having to look for the DOI to include in the cover letter / manuscript submission system ๐Ÿ˜…

23.11.2024 17:22 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

I also submit to a preprint server after journal submission, so I donโ€™t have declare it to the journal ๐Ÿซข. Just be careful with updating the preprint; preprint servers state that itโ€™s fine to upload the revised manuscript, but some journals (at least Biophys J) does not accept that ๐Ÿ˜ก

23.11.2024 16:13 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

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